RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 UBN2Q6ZU65 1347 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 MAST2Q6P0Q8 1798 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 GOLIM4O00461 696 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 FGFR2P21802 821 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 RESTQ13127 1097 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 FOXD4L5Q5VV16 416 aaPredicted RBP13.26□□□□□ -0.29
MSH3-201ENST00000265081 FOXD4L4Q8WXT5 416 aaPredicted RBP13.26□□□□□ -0.29
MSH3-201ENST00000265081 RGL2O15211 777 aa13.25□□□□□ -0.29
MSH3-201ENST00000265081 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
MSH3-201ENST00000265081 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
MSH3-201ENST00000265081 DNM1Q05193 864 aaKnown RBP13.25□□□□□ -0.29
MSH3-201ENST00000265081 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
MSH3-201ENST00000265081 Q6ZUG5 572 aa13.25□□□□□ -0.29
MSH3-201ENST00000265081 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
MSH3-201ENST00000265081 ZNF274Q96GC6 653 aaPredicted RBP13.25□□□□□ -0.29
MSH3-201ENST00000265081 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
MSH3-201ENST00000265081 NOL7Q9UMY1 257 aaKnown RBP13.25□□□□□ -0.29
MSH3-201ENST00000265081 SCRN1Q12765 414 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 NID2Q14112 1375 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 E7EWF7 191 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
MSH3-201ENST00000265081 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
MSH3-201ENST00000265081 CEP126Q9P2H0 1117 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 ADORA1P30542 326 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 ADD1P35611 737 aaKnown RBP13.24□□□□□ -0.29
MSH3-201ENST00000265081 KCNJ4P48050 445 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
MSH3-201ENST00000265081 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
MSH3-201ENST00000265081 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
MSH3-201ENST00000265081 ZSCAN30Q86W11 494 aa13.24□□□□□ -0.29
MSH3-201ENST00000265081 NSUN7Q8NE18 718 aaKnown RBP13.24□□□□□ -0.29
MSH3-201ENST00000265081 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
MSH3-201ENST00000265081 MCM5P33992 734 aa13.23□□□□□ -0.29
MSH3-201ENST00000265081 TTC6Q86TZ1 520 aa13.23□□□□□ -0.29
MSH3-201ENST00000265081 ZBTB22O15209 634 aa13.23□□□□□ -0.29
MSH3-201ENST00000265081 SCARF1Q14162 830 aa13.23□□□□□ -0.29
MSH3-201ENST00000265081 LRRFIP1Q32MZ4 808 aaKnown RBP13.23□□□□□ -0.29
MSH3-201ENST00000265081 BARGINQ6ZT62 677 aa13.23□□□□□ -0.29
MSH3-201ENST00000265081 FAM89AQ96GI7 184 aa13.23□□□□□ -0.29
MSH3-201ENST00000265081 ZBTB1Q9Y2K1 713 aa13.23□□□□□ -0.29
MSH3-201ENST00000265081 TCRBV5S4A2TA0A5A2 114 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 PDE8AO60658 829 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 IFIT5Q13325 482 aaKnown RBP13.22□□□□□ -0.29
MSH3-201ENST00000265081 APPBP2Q92624 585 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 LAMB1P07942 1786 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 CACNA1SQ13698 1873 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 CCDC158Q5M9N0 1113 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 MB21D2Q8IYB1 491 aaPredicted RBP13.22□□□□□ -0.29
MSH3-201ENST00000265081 ZSCAN16Q9H4T2 348 aaPredicted RBP13.22□□□□□ -0.29
MSH3-201ENST00000265081 GREM2Q9H772 168 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 CARMIL3Q8ND23 1372 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
MSH3-201ENST00000265081 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 ITGA6P23229 1130 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 MCAMP43121 646 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 ATL3Q6DD88 541 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 ARXQ96QS3 562 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 NBPF3Q9H094 633 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 A0A0G2JLW4 131 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 KRT85P78386 507 aa13.21□□□□□ -0.29
MSH3-201ENST00000265081 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
MSH3-201ENST00000265081 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.3
MSH3-201ENST00000265081 SBF2Q86WG5 1849 aa13.21□□□□□ -0.3
MSH3-201ENST00000265081 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.3
MSH3-201ENST00000265081 ADD2P35612 726 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 BTAF1O14981 1849 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 EXOC5O00471 708 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 JAK2O60674 1132 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 PDE8BO95263 885 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
MSH3-201ENST00000265081 LEO1Q8WVC0 666 aaPredicted RBP13.2□□□□□ -0.3
MSH3-201ENST00000265081 CAMTA2O94983 1202 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 PDIA3P30101 505 aaKnown RBP13.19□□□□□ -0.3
MSH3-201ENST00000265081 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
MSH3-201ENST00000265081 SYNE4Q8N205 404 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 ZAP70P43403 619 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 ALX1Q15699 326 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 ATP2B3Q16720 1220 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 ANKRD18BA2A2Z9 1011 aa13.19□□□□□ -0.3
MSH3-201ENST00000265081 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
MSH3-201ENST00000265081 TTF1Q15361 905 aaPredicted RBP13.18□□□□□ -0.3
MSH3-201ENST00000265081 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
MSH3-201ENST00000265081 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
MSH3-201ENST00000265081 BRF1Q92994 677 aa13.18□□□□□ -0.3
MSH3-201ENST00000265081 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
MSH3-201ENST00000265081 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
MSH3-201ENST00000265081 ANTXR2P58335 489 aa13.18□□□□□ -0.3
MSH3-201ENST00000265081 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
MSH3-201ENST00000265081 FIBPO43427 364 aa13.18□□□□□ -0.3
MSH3-201ENST00000265081 DZIP3Q86Y13 1208 aaKnown RBP13.18□□□□□ -0.3
MSH3-201ENST00000265081 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
MSH3-201ENST00000265081 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms