RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 DBNDD2Q9BQY9 259 aa29.97■■■□□ 2.39
SCN1B-201ENST00000262631 C6orf229H3BNL8 230 aa29.95■■■□□ 2.39
SCN1B-201ENST00000262631 ATP2B4P23634 1241 aa29.95■■■□□ 2.39
SCN1B-201ENST00000262631 TXNRD3Q86VQ6 643 aa29.95■■■□□ 2.39
SCN1B-201ENST00000262631 XAGE2Q96GT9 111 aa29.95■■■□□ 2.39
SCN1B-201ENST00000262631 IRS2Q9Y4H2 1338 aa29.95■■■□□ 2.39
SCN1B-201ENST00000262631 IFIT2P09913 472 aaKnown RBP29.95■■■□□ 2.38
SCN1B-201ENST00000262631 SLC5A1P13866 664 aa29.95■■■□□ 2.38
SCN1B-201ENST00000262631 SOGA3Q5TF21 947 aa29.94■■■□□ 2.38
SCN1B-201ENST00000262631 RTKN2Q8IZC4 609 aa29.94■■■□□ 2.38
SCN1B-201ENST00000262631 RTFDC1Q9BY42 306 aaPredicted RBP29.94■■■□□ 2.38
SCN1B-201ENST00000262631 IFIT1P09914 478 aaKnown RBP29.93■■■□□ 2.38
SCN1B-201ENST00000262631 YBX3P16989 372 aaKnown RBP eCLIP29.93■■■□□ 2.38
SCN1B-201ENST00000262631 SALL3Q9BXA9 1300 aa29.93■■■□□ 2.38
SCN1B-201ENST00000262631 TSHZ3Q63HK5 1081 aa29.91■■■□□ 2.38
SCN1B-201ENST00000262631 GYG1P46976 350 aa29.91■■■□□ 2.38
SCN1B-201ENST00000262631 GRIPAP1Q4V328 841 aa29.91■■■□□ 2.38
SCN1B-201ENST00000262631 NFKBIEO00221 500 aa29.9■■■□□ 2.38
SCN1B-201ENST00000262631 ARFGEF1Q9Y6D6 1849 aa29.9■■■□□ 2.38
SCN1B-201ENST00000262631 BCAMP50895 628 aa29.89■■■□□ 2.38
SCN1B-201ENST00000262631 PLEKHM2Q8IWE5 1019 aa29.89■■■□□ 2.38
SCN1B-201ENST00000262631 FAM84BQ96KN1 310 aaPredicted RBP29.89■■■□□ 2.38
SCN1B-201ENST00000262631 PSMD1Q99460 953 aa29.89■■■□□ 2.38
SCN1B-201ENST00000262631 MX1P20591 662 aa29.88■■■□□ 2.37
SCN1B-201ENST00000262631 C15orf52Q6ZUT6 534 aaKnown RBP29.88■■■□□ 2.37
SCN1B-201ENST00000262631 ARAP2Q8WZ64 1704 aa29.88■■■□□ 2.37
SCN1B-201ENST00000262631 MED23Q9ULK4 1368 aa29.88■■■□□ 2.37
SCN1B-201ENST00000262631 RIMBP2O15034 1052 aa29.88■■■□□ 2.37
SCN1B-201ENST00000262631 PHKA1P46020 1223 aa29.88■■■□□ 2.37
SCN1B-201ENST00000262631 FKBP4Q02790 459 aaKnown RBP eCLIP29.88■■■□□ 2.37
SCN1B-201ENST00000262631 WASHC4Q2M389 1173 aa29.88■■■□□ 2.37
SCN1B-201ENST00000262631 GORABQ5T7V8 394 aa29.87■■■□□ 2.37
SCN1B-201ENST00000262631 CCDC102BQ68D86 513 aa29.87■■■□□ 2.37
SCN1B-201ENST00000262631 ZNF277Q9NRM2 450 aaPredicted RBP29.87■■■□□ 2.37
SCN1B-201ENST00000262631 RGS3P49796 1198 aa29.86■■■□□ 2.37
SCN1B-201ENST00000262631 PDE1AP54750 535 aa29.86■■■□□ 2.37
SCN1B-201ENST00000262631 FBXO33Q7Z6M2 555 aa29.85■■■□□ 2.37
SCN1B-201ENST00000262631 ZC3H12CQ9C0D7 883 aaKnown RBP29.85■■■□□ 2.37
SCN1B-201ENST00000262631 TAOK3Q9H2K8 898 aa29.85■■■□□ 2.37
SCN1B-201ENST00000262631 FER1L6Q2WGJ9 1857 aa29.85■■■□□ 2.37
SCN1B-201ENST00000262631 RASSF7Q02833 373 aa29.85■■■□□ 2.37
SCN1B-201ENST00000262631 AOC3Q16853 763 aa29.85■■■□□ 2.37
SCN1B-201ENST00000262631 STAP2Q9UGK3 403 aa29.85■■■□□ 2.37
SCN1B-201ENST00000262631 CAVIN4Q5BKX8 364 aa29.84■■■□□ 2.37
SCN1B-201ENST00000262631 SUPT20HQ8NEM7 779 aa29.84■■■□□ 2.37
SCN1B-201ENST00000262631 EYA3Q99504 573 aa29.84■■■□□ 2.37
SCN1B-201ENST00000262631 ECHDC1Q9NTX5 307 aa29.84■■■□□ 2.37
SCN1B-201ENST00000262631 HIBADHP31937 336 aaKnown RBP29.83■■■□□ 2.37
SCN1B-201ENST00000262631 ARHGAP27Q6ZUM4 889 aa29.83■■■□□ 2.37
SCN1B-201ENST00000262631 PRELPP51888 382 aa29.82■■■□□ 2.36
SCN1B-201ENST00000262631 KIAA2012Q0VF49 1180 aa29.82■■■□□ 2.36
SCN1B-201ENST00000262631 CCDC158Q5M9N0 1113 aa29.82■■■□□ 2.36
SCN1B-201ENST00000262631 VPS37DQ86XT2 251 aa29.82■■■□□ 2.36
SCN1B-201ENST00000262631 PI4K2BQ8TCG2 481 aa29.82■■■□□ 2.36
SCN1B-201ENST00000262631 IQSEC3Q9UPP2 1182 aaPredicted RBP29.82■■■□□ 2.36
SCN1B-201ENST00000262631 SCARF1Q14162 830 aa29.82■■■□□ 2.36
SCN1B-201ENST00000262631 GPATCH3Q96I76 525 aa29.82■■■□□ 2.36
SCN1B-201ENST00000262631 TTC41PQ6P2S7 1318 aa29.81■■■□□ 2.36
SCN1B-201ENST00000262631 LTBP3Q9NS15 1303 aa29.81■■■□□ 2.36
SCN1B-201ENST00000262631 PPIP5K2O43314 1243 aa29.81■■■□□ 2.36
SCN1B-201ENST00000262631 GPR162Q16538 588 aa29.81■■■□□ 2.36
SCN1B-201ENST00000262631 DOK7Q18PE1 504 aa29.81■■■□□ 2.36
SCN1B-201ENST00000262631 TTC39AQ5SRH9 613 aa29.81■■■□□ 2.36
SCN1B-201ENST00000262631 ZNF804AQ7Z570 1209 aa29.8■■■□□ 2.36
SCN1B-201ENST00000262631 OSBPL3Q9H4L5 887 aa29.8■■■□□ 2.36
SCN1B-201ENST00000262631 COL4A5P29400 1685 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 ATP5JP18859 108 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 ARID4AP29374 1257 aaPredicted RBP29.79■■■□□ 2.36
SCN1B-201ENST00000262631 RASGRF1Q13972 1273 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 PI16Q6UXB8 463 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 BOLA2Q9H3K6 86 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 DBNDD1Q9H9R9 158 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 CD209Q9NNX6 404 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 NDUFB9Q9Y6M9 179 aa29.79■■■□□ 2.36
SCN1B-201ENST00000262631 IARSP41252 1262 aaKnown RBP29.78■■■□□ 2.36
SCN1B-201ENST00000262631 MCAMP43121 646 aa29.78■■■□□ 2.36
SCN1B-201ENST00000262631 ZNF512BQ96KM6 892 aaPredicted RBP29.78■■■□□ 2.36
SCN1B-201ENST00000262631 COL1A1P02452 1464 aaPredicted RBP29.77■■■□□ 2.36
SCN1B-201ENST00000262631 LARGE2Q8N3Y3 721 aa29.76■■■□□ 2.36
SCN1B-201ENST00000262631 TDRD7Q8NHU6 1098 aaKnown RBP29.76■■■□□ 2.36
SCN1B-201ENST00000262631 COA1Q9GZY4 146 aa29.76■■■□□ 2.36
SCN1B-201ENST00000262631 AOX1Q06278 1338 aa29.76■■■□□ 2.35
SCN1B-201ENST00000262631 GLRX3O76003 335 aaKnown RBP29.76■■■□□ 2.35
SCN1B-201ENST00000262631 UQCRFS1P1P0C7P4 283 aa29.76■■■□□ 2.35
SCN1B-201ENST00000262631 IL1R1P14778 569 aa29.76■■■□□ 2.35
SCN1B-201ENST00000262631 SNRKQ9NRH2 765 aa29.76■■■□□ 2.35
SCN1B-201ENST00000262631 GNL3LQ9NVN8 582 aaKnown RBP29.76■■■□□ 2.35
SCN1B-201ENST00000262631 ERC2O15083 957 aa29.75■■■□□ 2.35
SCN1B-201ENST00000262631 VPS33BQ9H267 617 aa29.75■■■□□ 2.35
SCN1B-201ENST00000262631 HMG20BQ9P0W2 317 aa29.75■■■□□ 2.35
SCN1B-201ENST00000262631 ECE2O60344 883 aa29.74■■■□□ 2.35
SCN1B-201ENST00000262631 KCNQ5Q9NR82 932 aa29.74■■■□□ 2.35
SCN1B-201ENST00000262631 GSPT1P15170 499 aaKnown RBP29.73■■■□□ 2.35
SCN1B-201ENST00000262631 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.73■■■□□ 2.35
SCN1B-201ENST00000262631 JAG2Q9Y219 1238 aa29.73■■■□□ 2.35
SCN1B-201ENST00000262631 G3V3G9 751 aa29.72■■■□□ 2.35
SCN1B-201ENST00000262631 FRAT2O75474 233 aaPredicted RBP29.72■■■□□ 2.35
SCN1B-201ENST00000262631 MAP4K4O95819 1239 aaPredicted RBP29.72■■■□□ 2.35
SCN1B-201ENST00000262631 TTC22Q5TAA0 569 aa29.72■■■□□ 2.35
SCN1B-201ENST00000262631 DCAF8Q5TAQ9 597 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms