RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
SGCA-201ENST00000262018 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
SGCA-201ENST00000262018 SPRYD7Q5W111 196 aa16.97■□□□□ 0.31
SGCA-201ENST00000262018 ARMC9Q7Z3E5 817 aa16.97■□□□□ 0.31
SGCA-201ENST00000262018 ARMC5Q96C12 935 aa16.97■□□□□ 0.31
SGCA-201ENST00000262018 TMEM106CQ9BVX2 250 aa16.97■□□□□ 0.31
SGCA-201ENST00000262018 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.97■□□□□ 0.31
SGCA-201ENST00000262018 IL16Q14005 1332 aa16.97■□□□□ 0.31
SGCA-201ENST00000262018 CEP290O15078 2479 aa16.97■□□□□ 0.31
SGCA-201ENST00000262018 H0YGN5 161 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
SGCA-201ENST00000262018 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 CD99L2Q8TCZ2 262 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 ERO1AQ96HE7 468 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 GMLQ99445 158 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 ZNF609O15014 1411 aa16.96■□□□□ 0.31
SGCA-201ENST00000262018 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.3
SGCA-201ENST00000262018 IFNL1Q8IU54 200 aa16.96■□□□□ 0.3
SGCA-201ENST00000262018 COL4A1P02462 1669 aa16.95■□□□□ 0.3
SGCA-201ENST00000262018 OTUD5Q96G74 571 aa16.95■□□□□ 0.3
SGCA-201ENST00000262018 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
SGCA-201ENST00000262018 EFCC1Q9HA90 598 aa16.95■□□□□ 0.3
SGCA-201ENST00000262018 ANKIB1Q9P2G1 1089 aa16.95■□□□□ 0.3
SGCA-201ENST00000262018 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
SGCA-201ENST00000262018 HTTP42858 3142 aa16.94■□□□□ 0.3
SGCA-201ENST00000262018 MANSC4A6NHS7 340 aaPredicted RBP16.94■□□□□ 0.3
SGCA-201ENST00000262018 INHBEP58166 350 aa16.94■□□□□ 0.3
SGCA-201ENST00000262018 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
SGCA-201ENST00000262018 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
SGCA-201ENST00000262018 PODXL2Q9NZ53 605 aa16.94■□□□□ 0.3
SGCA-201ENST00000262018 USP17L3A6NCW0 530 aa16.93■□□□□ 0.3
SGCA-201ENST00000262018 USP17L4A6NCW7 530 aa16.93■□□□□ 0.3
SGCA-201ENST00000262018 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
SGCA-201ENST00000262018 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
SGCA-201ENST00000262018 USP17L1Q7RTZ2 530 aa16.93■□□□□ 0.3
SGCA-201ENST00000262018 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
SGCA-201ENST00000262018 ANGEL1Q9UNK9 670 aaKnown RBP16.93■□□□□ 0.3
SGCA-201ENST00000262018 IGF2BP3O00425 579 aaKnown RBP eCLIP16.92■□□□□ 0.3
SGCA-201ENST00000262018 SLC10A4Q96EP9 437 aa16.92■□□□□ 0.3
SGCA-201ENST00000262018 WNT10BO00744 389 aa16.91■□□□□ 0.3
SGCA-201ENST00000262018 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
SGCA-201ENST00000262018 SLC4A8Q2Y0W8 1093 aa16.91■□□□□ 0.3
SGCA-201ENST00000262018 ZNF333Q96JL9 665 aa16.91■□□□□ 0.3
SGCA-201ENST00000262018 FZD1Q9UP38 647 aa16.91■□□□□ 0.3
SGCA-201ENST00000262018 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
SGCA-201ENST00000262018 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
SGCA-201ENST00000262018 SASH1O94885 1247 aa16.89■□□□□ 0.29
SGCA-201ENST00000262018 CRHR2Q13324 411 aa16.89■□□□□ 0.29
SGCA-201ENST00000262018 OGFOD1Q8N543 542 aa16.89■□□□□ 0.29
SGCA-201ENST00000262018 MXD3Q9BW11 206 aa16.89■□□□□ 0.29
SGCA-201ENST00000262018 SEC31BQ9NQW1 1179 aa16.89■□□□□ 0.29
SGCA-201ENST00000262018 RBM27Q9P2N5 1060 aaKnown RBP16.89■□□□□ 0.29
SGCA-201ENST00000262018 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
SGCA-201ENST00000262018 MYCP01106 439 aaPredicted RBP16.88■□□□□ 0.29
SGCA-201ENST00000262018 CAP1Q01518 475 aa16.88■□□□□ 0.29
SGCA-201ENST00000262018 SP3Q02447 781 aa16.88■□□□□ 0.29
SGCA-201ENST00000262018 PODNQ7Z5L7 613 aa16.88■□□□□ 0.29
SGCA-201ENST00000262018 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
SGCA-201ENST00000262018 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
SGCA-201ENST00000262018 PSME4Q14997 1843 aa16.88■□□□□ 0.29
SGCA-201ENST00000262018 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
SGCA-201ENST00000262018 ZBTB48P10074 688 aaPredicted RBP16.87■□□□□ 0.29
SGCA-201ENST00000262018 SLC9C1Q4G0N8 1177 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 APOBEC3FQ8IUX4 373 aaKnown RBP16.87■□□□□ 0.29
SGCA-201ENST00000262018 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 CUL9Q8IWT3 2517 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 SZT2Q5T011 3432 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 PTCH2Q9Y6C5 1203 aa16.87■□□□□ 0.29
SGCA-201ENST00000262018 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
SGCA-201ENST00000262018 PLBD2Q8NHP8 589 aa16.86■□□□□ 0.29
SGCA-201ENST00000262018 CENPFP49454 3210 aa16.86■□□□□ 0.29
SGCA-201ENST00000262018 XDHP47989 1333 aa16.85■□□□□ 0.29
SGCA-201ENST00000262018 DACT2Q5SW24 774 aa16.85■□□□□ 0.29
SGCA-201ENST00000262018 DPF3Q92784 378 aa16.85■□□□□ 0.29
SGCA-201ENST00000262018 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
SGCA-201ENST00000262018 ZNF853P0CG23 659 aa16.84■□□□□ 0.29
SGCA-201ENST00000262018 ATP2B4P23634 1241 aa16.84■□□□□ 0.29
SGCA-201ENST00000262018 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
SGCA-201ENST00000262018 TSR2Q969E8 191 aaKnown RBP16.84■□□□□ 0.29
SGCA-201ENST00000262018 CHL1O00533 1208 aa16.83■□□□□ 0.28
SGCA-201ENST00000262018 PPP1R12BO60237 982 aaPredicted RBP16.83■□□□□ 0.28
SGCA-201ENST00000262018 PLIN1O60240 522 aa16.83■□□□□ 0.28
SGCA-201ENST00000262018 RARSP54136 660 aaKnown RBP16.83■□□□□ 0.28
SGCA-201ENST00000262018 GNAI1P63096 354 aa16.83■□□□□ 0.28
SGCA-201ENST00000262018 ARHGEF6Q15052 776 aa16.83■□□□□ 0.28
SGCA-201ENST00000262018 MAP3K11Q16584 847 aa16.83■□□□□ 0.28
SGCA-201ENST00000262018 CCDC85AQ96PX6 553 aaPredicted RBP16.83■□□□□ 0.28
SGCA-201ENST00000262018 CHPF2Q9P2E5 772 aa16.83■□□□□ 0.28
SGCA-201ENST00000262018 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
SGCA-201ENST00000262018 MYO3BQ8WXR4 1341 aa16.82■□□□□ 0.28
SGCA-201ENST00000262018 WTIPA6NIX2 430 aaPredicted RBP16.82■□□□□ 0.28
SGCA-201ENST00000262018 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
SGCA-201ENST00000262018 BCAR3O75815 825 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms