RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 BRF1Q92994 677 aa26.6■■□□□ 1.85
MCF2L-201ENST00000261963 MAST3O60307 1309 aa26.6■■□□□ 1.85
MCF2L-201ENST00000261963 A0A0G2JLW4 131 aa26.6■■□□□ 1.85
MCF2L-201ENST00000261963 CEP126Q9P2H0 1117 aa26.6■■□□□ 1.85
MCF2L-201ENST00000261963 RNF113AO15541 343 aaKnown RBP26.59■■□□□ 1.85
MCF2L-201ENST00000261963 HSPD1P10809 573 aaKnown RBP26.59■■□□□ 1.85
MCF2L-201ENST00000261963 U2AF2P26368 475 aaKnown RBP eCLIP26.59■■□□□ 1.852e-7■■□□□ 11.9
MCF2L-201ENST00000261963 CCDC57Q2TAC2 916 aa26.59■■□□□ 1.85
MCF2L-201ENST00000261963 KLHL34Q8N239 644 aa26.59■■□□□ 1.85
MCF2L-201ENST00000261963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.59■■□□□ 1.85
MCF2L-201ENST00000261963 HSP90B1P14625 803 aaKnown RBP26.58■■□□□ 1.85
MCF2L-201ENST00000261963 SCRN1Q12765 414 aa26.58■■□□□ 1.85
MCF2L-201ENST00000261963 DHX32Q7L7V1 743 aaKnown RBP26.58■■□□□ 1.85
MCF2L-201ENST00000261963 FAM89AQ96GI7 184 aa26.58■■□□□ 1.85
MCF2L-201ENST00000261963 PCCAP05165 728 aaPredicted RBP26.58■■□□□ 1.85
MCF2L-201ENST00000261963 ADORA1P30542 326 aa26.58■■□□□ 1.85
MCF2L-201ENST00000261963 FEZ1Q99689 392 aa26.58■■□□□ 1.85
MCF2L-201ENST00000261963 HMGB1P09429 215 aaKnown RBP26.57■■□□□ 1.84
MCF2L-201ENST00000261963 PLA2G12BQ9BX93 195 aa26.57■■□□□ 1.84
MCF2L-201ENST00000261963 CTIFO43310 598 aaKnown RBP26.57■■□□□ 1.84
MCF2L-201ENST00000261963 EXOSC10Q01780 885 aaKnown RBP26.57■■□□□ 1.84
MCF2L-201ENST00000261963 TAF3Q5VWG9 929 aa26.57■■□□□ 1.84
MCF2L-201ENST00000261963 M0R2C6 588 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 PLCB2Q00722 1185 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 CCDC85AQ96PX6 553 aaPredicted RBP26.56■■□□□ 1.84
MCF2L-201ENST00000261963 TFIP11Q9UBB9 837 aaKnown RBP26.56■■□□□ 1.84
MCF2L-201ENST00000261963 FBXO3Q9UK99 471 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 SPEF2Q9C093 1822 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 PFKFB2O60825 505 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 CSF1RP07333 972 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 LIG1P18858 919 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 SMARCC2Q8TAQ2 1214 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 TEX13AQ9BXU3 409 aaPredicted RBP26.56■■□□□ 1.84
MCF2L-201ENST00000261963 AGXT2Q9BYV1 514 aa26.56■■□□□ 1.84
MCF2L-201ENST00000261963 RESTQ13127 1097 aa26.55■■□□□ 1.84
MCF2L-201ENST00000261963 KIF6Q6ZMV9 814 aa26.55■■□□□ 1.84
MCF2L-201ENST00000261963 OSBP2Q969R2 916 aa26.55■■□□□ 1.84
MCF2L-201ENST00000261963 XAGE2Q96GT9 111 aa26.55■■□□□ 1.84
MCF2L-201ENST00000261963 SCAND2PQ9GZW5 306 aaPredicted RBP26.55■■□□□ 1.84
MCF2L-201ENST00000261963 PYCARDQ9ULZ3 195 aa26.55■■□□□ 1.84
MCF2L-201ENST00000261963 E7EWF7 191 aa26.55■■□□□ 1.84
MCF2L-201ENST00000261963 LAMA4Q16363 1823 aa26.54■■□□□ 1.84
MCF2L-201ENST00000261963 ZBTB38Q8NAP3 1195 aaPredicted RBP26.54■■□□□ 1.84
MCF2L-201ENST00000261963 LEO1Q8WVC0 666 aaPredicted RBP26.54■■□□□ 1.84
MCF2L-201ENST00000261963 DDX11Q96FC9 970 aa26.54■■□□□ 1.84
MCF2L-201ENST00000261963 KCNF1Q9H3M0 494 aa26.54■■□□□ 1.84
MCF2L-201ENST00000261963 FKBP4Q02790 459 aaKnown RBP eCLIP26.54■■□□□ 1.842e-6■□□□□ 10.6
MCF2L-201ENST00000261963 SPATA32Q96LK8 384 aa26.54■■□□□ 1.84
MCF2L-201ENST00000261963 SYNE4Q8N205 404 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 MAP3K15Q6ZN16 1313 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 GOLGA6L6A8MZA4 724 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 APOBRQ0VD83 1088 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 SCARF1Q14162 830 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 CCDC158Q5M9N0 1113 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 NSUN7Q8NE18 718 aaKnown RBP26.53■■□□□ 1.84
MCF2L-201ENST00000261963 LLPHQ9BRT6 129 aaKnown RBP26.53■■□□□ 1.84
MCF2L-201ENST00000261963 OGFRQ9NZT2 677 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 AKAP2Q9Y2D5 859 aa26.53■■□□□ 1.84
MCF2L-201ENST00000261963 CTDNEP1O95476 244 aa26.52■■□□□ 1.84
MCF2L-201ENST00000261963 STARD3NLO95772 234 aa26.52■■□□□ 1.84
MCF2L-201ENST00000261963 TTC39AQ5SRH9 613 aa26.52■■□□□ 1.84
MCF2L-201ENST00000261963 TTLL5Q6EMB2 1281 aa26.52■■□□□ 1.84
MCF2L-201ENST00000261963 FOXP2O15409 715 aa26.51■■□□□ 1.84
MCF2L-201ENST00000261963 HLFQ16534 295 aa26.51■■□□□ 1.84
MCF2L-201ENST00000261963 GIGYF2Q6Y7W6 1299 aaKnown RBP26.51■■□□□ 1.84
MCF2L-201ENST00000261963 BTG4Q9NY30 223 aa26.51■■□□□ 1.84
MCF2L-201ENST00000261963 NHSL1Q5SYE7 1610 aa26.51■■□□□ 1.83
MCF2L-201ENST00000261963 IFIT5Q13325 482 aaKnown RBP26.5■■□□□ 1.83
MCF2L-201ENST00000261963 BBXQ8WY36 941 aaPredicted RBP26.5■■□□□ 1.83
MCF2L-201ENST00000261963 SLC4A9Q96Q91 983 aa26.5■■□□□ 1.83
MCF2L-201ENST00000261963 RIC1Q4ADV7 1423 aa26.5■■□□□ 1.83
MCF2L-201ENST00000261963 GORABQ5T7V8 394 aa26.5■■□□□ 1.83
MCF2L-201ENST00000261963 IGSF3O75054 1194 aa26.49■■□□□ 1.83
MCF2L-201ENST00000261963 ZNF771Q7L3S4 317 aaPredicted RBP26.49■■□□□ 1.83
MCF2L-201ENST00000261963 NUP62CLQ9H1M0 184 aa26.49■■□□□ 1.83
MCF2L-201ENST00000261963 H3BQV1 296 aa26.49■■□□□ 1.83
MCF2L-201ENST00000261963 TAF7LQ5H9L4 462 aa26.49■■□□□ 1.83
MCF2L-201ENST00000261963 IFFO2Q5TF58 517 aa26.49■■□□□ 1.83
MCF2L-201ENST00000261963 PGBD1Q96JS3 809 aa26.49■■□□□ 1.83
MCF2L-201ENST00000261963 AP5Z1O43299 807 aa26.48■■□□□ 1.83
MCF2L-201ENST00000261963 GPTP24298 496 aa26.48■■□□□ 1.83
MCF2L-201ENST00000261963 NLRP10Q86W26 655 aa26.48■■□□□ 1.83
MCF2L-201ENST00000261963 DACT1Q9NYF0 836 aa26.48■■□□□ 1.83
MCF2L-201ENST00000261963 CDHR2Q9BYE9 1310 aa26.48■■□□□ 1.83
MCF2L-201ENST00000261963 DISP2A7MBM2 1401 aa26.48■■□□□ 1.83
MCF2L-201ENST00000261963 PTPDC1A2A3K4 754 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 CCDC192P0DO97 292 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 ZAP70P43403 619 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 CAMK4Q16566 473 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 MAP3K11Q16584 847 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 CHST3Q7LGC8 479 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 SPC24Q8NBT2 197 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 ZSCAN16Q9H4T2 348 aaPredicted RBP26.47■■□□□ 1.83
MCF2L-201ENST00000261963 RIPOR2Q9Y4F9 1068 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 CCT2P78371 535 aaKnown RBP26.47■■□□□ 1.83
MCF2L-201ENST00000261963 PI16Q6UXB8 463 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 SALL1Q9NSC2 1324 aa26.47■■□□□ 1.83
MCF2L-201ENST00000261963 ZFYP08048 801 aaPredicted RBP26.46■■□□□ 1.83
MCF2L-201ENST00000261963 CYP19A1P11511 503 aaPredicted RBP26.46■■□□□ 1.83
MCF2L-201ENST00000261963 SYCP1Q15431 976 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms