RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 NLRP5P59047 1200 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 PUM3Q15397 648 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 PIBF1Q8WXW3 757 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 USP19O94966 1318 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 NEXMIFQ5QGS0 1516 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 ZBTB43O43298 467 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 VTI1AQ96AJ9 217 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 TM6SF1Q9BZW5 370 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 CPSF1Q10570 1443 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 TBCAO75347 108 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 CYLC1P35663 651 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 EIF4A2Q14240 407 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 ZFYVE27Q5T4F4 411 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 TANGO6Q9C0B7 1094 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 SIL1Q9H173 461 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 PLCD1P51178 756 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 WDR78Q5VTH9 848 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 MCM10Q7L590 875 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 RNMTO43148 476 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 FOXO3O43524 673 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 STX10O60499 249 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 FOXD4L5Q5VV16 416 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 CNNM3Q8NE01 707 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 FOXD4L4Q8WXT5 416 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 RRP36Q96EU6 259 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 POLKQ9UBT6 870 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 INO80Q9ULG1 1556 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 hCG_1984214I3L0E3 225 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 EXOC8Q8IYI6 725 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 UBXN4Q92575 508 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 METTL22Q9BUU2 404 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 SELENOOQ9BVL4 669 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 EXOC1Q9NV70 894 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 NCOA3Q9Y6Q9 1424 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 KRT83P78385 493 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 TBC1D9Q6ZT07 1266 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 IWS1Q96ST2 819 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 RFX7Q2KHR2 1363 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 TRIM37O94972 964 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 IFIT1BQ5T764 474 aaKnown RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 ESYT1Q9BSJ8 1104 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 GPR108Q9NPR9 543 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 HMGB3O15347 200 aaKnown RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 HOXC9P31274 260 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 KIF4BQ2VIQ3 1234 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 ABCC12Q96J65 1359 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CNGA1P29973 690 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 ZC3H6P61129 1189 aaKnown RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 BRDTQ58F21 947 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CDAN1Q8IWY9 1227 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 KIAA1524Q8TCG1 905 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PHLPP2Q6ZVD8 1323 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CHL1O00533 1208 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 ZNF189O75820 626 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 FBXO31Q5XUX0 539 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 NAA16Q6N069 864 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CRACR2AQ9BSW2 395 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PAG1Q9NWQ8 432 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 EMILIN1Q9Y6C2 1016 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 NPHP4O75161 1426 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 RNF113AO15541 343 aaKnown RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 ZSCAN22P10073 491 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 ALDH1B1P30837 517 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PDE1AP54750 535 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PIP4K2BP78356 416 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PTPN14Q15678 1187 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PRPF40BQ6NWY9 871 aaKnown RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CCDC174Q6PII3 467 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CACNA2D4Q7Z3S7 1137 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CALR3Q96L12 384 aaKnown RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 FAM81BQ96LP2 452 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PI4KAP2A4QPH2 592 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 TSPY2A6NKD2 308 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 NEBLO76041 1014 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CFAP100Q494V2 611 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 RILPL1Q5EBL4 403 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 DHX32Q7L7V1 743 aaKnown RBP4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PI4KAP1Q8N8J0 262 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CSRNP2Q9H175 543 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 KDRP35968 1356 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 CCDC96Q2M329 555 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 PARP3Q9Y6F1 533 aa4.92□□□□□ -1.62
VPS13C-202ENST00000261517 ARID4AP29374 1257 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CASQ1P31415 396 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 UBE3BQ7Z3V4 1068 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 ABCF2Q9UG63 623 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 ATP2B2Q01814 1243 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 TNFAIP1Q13829 316 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CC2D2BQ6DHV5 1058 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 IMPG2Q9BZV3 1241 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 HAUS3Q68CZ6 603 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 LUZP1Q86V48 1076 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 CLTCL1P53675 1640 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 MADDQ8WXG6 1647 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 LMTK3Q96Q04 1460 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 DEPDC5O75140 1603 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 KRT13P13646 458 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 SH3TC1Q8TE82 1336 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 TRIM75PA6NK02 468 aa4.91□□□□□ -1.62
VPS13C-202ENST00000261517 GCP02774 474 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms