RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 XKR5Q6UX68 686 aa9.42□□□□□ -0.9
TRA2B-201ENST00000259043 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
TRA2B-201ENST00000259043 TMEM63CQ9P1W3 806 aa9.42□□□□□ -0.9
TRA2B-201ENST00000259043 EGFL7Q9UHF1 273 aa9.42□□□□□ -0.9
TRA2B-201ENST00000259043 RAXQ9Y2V3 346 aa9.42□□□□□ -0.9
TRA2B-201ENST00000259043 FAM13AO94988 1023 aa9.41□□□□□ -0.9
TRA2B-201ENST00000259043 TXKP42681 527 aa9.41□□□□□ -0.9
TRA2B-201ENST00000259043 ALKBH2Q6NS38 261 aa9.41□□□□□ -0.9
TRA2B-201ENST00000259043 TXNDC2Q86VQ3 553 aa9.41□□□□□ -0.9
TRA2B-201ENST00000259043 CACTIN-AS1Q8N1I8 211 aa9.41□□□□□ -0.9
TRA2B-201ENST00000259043 ELP3Q9H9T3 547 aa9.41□□□□□ -0.9
TRA2B-201ENST00000259043 ANO2Q9NQ90 1003 aa9.41□□□□□ -0.9
TRA2B-201ENST00000259043 ABI2Q9NYB9 513 aaPredicted RBP9.41□□□□□ -0.9
TRA2B-201ENST00000259043 FZD6O60353 706 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 KIF4AO95239 1232 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 ABL1P00519 1130 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 IGLV1-40P01703 118 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 GLB1P16278 677 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 SERPINB4P48594 390 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 IRAK1P51617 712 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 MUC3BQ9H195 1237 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 POLIQ9UNA4 740 aa9.4□□□□□ -0.9
TRA2B-201ENST00000259043 A6NHS1 94 aa9.39□□□□□ -0.91
TRA2B-201ENST00000259043 ICMTO60725 284 aa9.39□□□□□ -0.91
TRA2B-201ENST00000259043 COBLO75128 1261 aa9.39□□□□□ -0.91
TRA2B-201ENST00000259043 CYP2E1P05181 493 aaPredicted RBP9.39□□□□□ -0.91
TRA2B-201ENST00000259043 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
TRA2B-201ENST00000259043 AGGF1Q8N302 714 aaeCLIP9.39□□□□□ -0.91
TRA2B-201ENST00000259043 FMNL2Q96PY5 1086 aa9.39□□□□□ -0.91
TRA2B-201ENST00000259043 CNTN3Q9P232 1028 aa9.39□□□□□ -0.91
TRA2B-201ENST00000259043 KIAA1324LA8MWY0 1029 aaPredicted RBP9.38□□□□□ -0.91
TRA2B-201ENST00000259043 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
TRA2B-201ENST00000259043 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
TRA2B-201ENST00000259043 ZNF438Q7Z4V0 828 aa9.38□□□□□ -0.91
TRA2B-201ENST00000259043 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
TRA2B-201ENST00000259043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.38□□□□□ -0.91
TRA2B-201ENST00000259043 KRTAP4-8A0A0G2JLE6 195 aa9.37□□□□□ -0.91
TRA2B-201ENST00000259043 MED26O95402 600 aa9.37□□□□□ -0.91
TRA2B-201ENST00000259043 CCDC87Q9NVE4 849 aa9.37□□□□□ -0.91
TRA2B-201ENST00000259043 TRIM33Q9UPN9 1127 aa9.37□□□□□ -0.91
TRA2B-201ENST00000259043 PPME1Q9Y570 386 aa9.37□□□□□ -0.91
TRA2B-201ENST00000259043 PDE4CQ08493 712 aa9.36□□□□□ -0.91
TRA2B-201ENST00000259043 HYAL2Q12891 473 aa9.36□□□□□ -0.91
TRA2B-201ENST00000259043 C1orf127Q8N9H9 656 aa9.36□□□□□ -0.91
TRA2B-201ENST00000259043 UBL7Q96S82 380 aaPredicted RBP9.36□□□□□ -0.91
TRA2B-201ENST00000259043 CHRDQ9H2X0 955 aa9.36□□□□□ -0.91
TRA2B-201ENST00000259043 DHX15O43143 795 aaKnown RBP9.35□□□□□ -0.91
TRA2B-201ENST00000259043 TGFB1P01137 390 aa9.35□□□□□ -0.91
TRA2B-201ENST00000259043 PCSK2P16519 638 aa9.35□□□□□ -0.91
TRA2B-201ENST00000259043 GP2P55259 537 aaKnown RBP9.35□□□□□ -0.91
TRA2B-201ENST00000259043 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
TRA2B-201ENST00000259043 ADAMTSL4Q6UY14 1074 aa9.35□□□□□ -0.91
TRA2B-201ENST00000259043 GJD3Q8N144 294 aa9.35□□□□□ -0.91
TRA2B-201ENST00000259043 CEP120Q8N960 986 aa9.35□□□□□ -0.91
TRA2B-201ENST00000259043 CEP41Q9BYV8 373 aa9.35□□□□□ -0.91
TRA2B-201ENST00000259043 H3BRB1 525 aa9.34□□□□□ -0.91
TRA2B-201ENST00000259043 ARHGAP4P98171 946 aa9.34□□□□□ -0.91
TRA2B-201ENST00000259043 ATP11AP98196 1134 aa9.34□□□□□ -0.91
TRA2B-201ENST00000259043 TUT1Q9H6E5 874 aaKnown RBP9.34□□□□□ -0.91
TRA2B-201ENST00000259043 SALL4Q9UJQ4 1053 aa9.34□□□□□ -0.91
TRA2B-201ENST00000259043 OAS3Q9Y6K5 1087 aaKnown RBP9.34□□□□□ -0.91
TRA2B-201ENST00000259043 YBX3P16989 372 aaKnown RBP eCLIP9.33□□□□□ -0.923e-7■■□□□ 12.8
TRA2B-201ENST00000259043 UVSSAQ2YD98 709 aa9.33□□□□□ -0.92
TRA2B-201ENST00000259043 ARMC10Q8N2F6 343 aa9.33□□□□□ -0.92
TRA2B-201ENST00000259043 GALNT11Q8NCW6 608 aa9.33□□□□□ -0.92
TRA2B-201ENST00000259043 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
TRA2B-201ENST00000259043 LINC01387J3KSC0 135 aa9.32□□□□□ -0.92
TRA2B-201ENST00000259043 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
TRA2B-201ENST00000259043 USP5P45974 858 aa9.32□□□□□ -0.92
TRA2B-201ENST00000259043 AAMPQ13685 434 aa9.32□□□□□ -0.92
TRA2B-201ENST00000259043 INTS5Q6P9B9 1019 aaKnown RBP9.32□□□□□ -0.92
TRA2B-201ENST00000259043 ZDHHC13Q8IUH4 622 aa9.32□□□□□ -0.92
TRA2B-201ENST00000259043 RASSF4Q9H2L5 321 aa9.32□□□□□ -0.92
TRA2B-201ENST00000259043 TNFRSF21O75509 655 aa9.31□□□□□ -0.92
TRA2B-201ENST00000259043 CD68P34810 354 aaPredicted RBP9.31□□□□□ -0.92
TRA2B-201ENST00000259043 GRIK1P39086 918 aa9.31□□□□□ -0.92
TRA2B-201ENST00000259043 NFIAQ12857 509 aa9.31□□□□□ -0.92
TRA2B-201ENST00000259043 ACAD11Q709F0 780 aa9.31□□□□□ -0.92
TRA2B-201ENST00000259043 GLYCTKQ8IVS8 523 aa9.31□□□□□ -0.92
TRA2B-201ENST00000259043 NFKBIEO00221 500 aa9.3□□□□□ -0.92
TRA2B-201ENST00000259043 WISP1O95388 367 aa9.3□□□□□ -0.92
TRA2B-201ENST00000259043 EHHADHQ08426 723 aa9.3□□□□□ -0.92
TRA2B-201ENST00000259043 UTP4Q969X6 686 aaKnown RBP9.3□□□□□ -0.92
TRA2B-201ENST00000259043 SPACA7Q96KW9 195 aa9.3□□□□□ -0.92
TRA2B-201ENST00000259043 PBX4Q9BYU1 374 aa9.3□□□□□ -0.92
TRA2B-201ENST00000259043 FOXD3Q9UJU5 478 aaPredicted RBP9.3□□□□□ -0.92
TRA2B-201ENST00000259043 GNEQ9Y223 722 aaKnown RBP9.3□□□□□ -0.92
TRA2B-201ENST00000259043 BRD1O95696 1058 aa9.29□□□□□ -0.92
TRA2B-201ENST00000259043 ACPPP15309 386 aa9.29□□□□□ -0.92
TRA2B-201ENST00000259043 SPINK2P20155 84 aa9.29□□□□□ -0.92
TRA2B-201ENST00000259043 CES1P23141 567 aa9.29□□□□□ -0.92
TRA2B-201ENST00000259043 CEP135Q66GS9 1140 aa9.29□□□□□ -0.92
TRA2B-201ENST00000259043 NCAPG2Q86XI2 1143 aa9.29□□□□□ -0.92
TRA2B-201ENST00000259043 FAM46AQ96IP4 442 aaKnown RBP9.29□□□□□ -0.92
TRA2B-201ENST00000259043 EREGO14944 169 aa9.28□□□□□ -0.92
TRA2B-201ENST00000259043 RNF43Q68DV7 783 aa9.28□□□□□ -0.92
TRA2B-201ENST00000259043 TTC16Q8NEE8 873 aa9.28□□□□□ -0.92
TRA2B-201ENST00000259043 CCER1Q8TC90 406 aaPredicted RBP9.28□□□□□ -0.92
TRA2B-201ENST00000259043 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
TRA2B-201ENST00000259043 LACRTQ9GZZ8 138 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms