RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 TTLL11Q8NHH1 800 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 TSR2Q969E8 191 aaKnown RBP16.36■□□□□ 0.21
CSHL1-201ENST00000259003 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 FZD1Q9UP38 647 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 CACNA1FO60840 1977 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
CSHL1-201ENST00000259003 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
CSHL1-201ENST00000259003 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
CSHL1-201ENST00000259003 DACT2Q5SW24 774 aa16.35■□□□□ 0.21
CSHL1-201ENST00000259003 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
CSHL1-201ENST00000259003 FBXW7Q969H0 707 aa16.35■□□□□ 0.21
CSHL1-201ENST00000259003 R3HDMLQ9H3Y0 253 aa16.35■□□□□ 0.21
CSHL1-201ENST00000259003 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
CSHL1-201ENST00000259003 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
CSHL1-201ENST00000259003 SASH1O94885 1247 aa16.34■□□□□ 0.21
CSHL1-201ENST00000259003 GNAI1P63096 354 aa16.34■□□□□ 0.21
CSHL1-201ENST00000259003 SNAP23O00161 211 aa16.33■□□□□ 0.2
CSHL1-201ENST00000259003 PRKG1Q13976 671 aa16.33■□□□□ 0.2
CSHL1-201ENST00000259003 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
CSHL1-201ENST00000259003 CTU1Q7Z7A3 348 aaKnown RBP16.33■□□□□ 0.2
CSHL1-201ENST00000259003 WNT10BO00744 389 aa16.32■□□□□ 0.2
CSHL1-201ENST00000259003 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
CSHL1-201ENST00000259003 KSR2Q6VAB6 950 aa16.32■□□□□ 0.2
CSHL1-201ENST00000259003 PITPNM2Q9BZ72 1349 aa16.32■□□□□ 0.2
CSHL1-201ENST00000259003 MED23Q9ULK4 1368 aa16.32■□□□□ 0.2
CSHL1-201ENST00000259003 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
CSHL1-201ENST00000259003 PCDHAC2Q9Y5I4 1007 aa16.32■□□□□ 0.2
CSHL1-201ENST00000259003 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
CSHL1-201ENST00000259003 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
CSHL1-201ENST00000259003 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
CSHL1-201ENST00000259003 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
CSHL1-201ENST00000259003 CENPFP49454 3210 aa16.3■□□□□ 0.2
CSHL1-201ENST00000259003 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
CSHL1-201ENST00000259003 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
CSHL1-201ENST00000259003 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
CSHL1-201ENST00000259003 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
CSHL1-201ENST00000259003 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
CSHL1-201ENST00000259003 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
CSHL1-201ENST00000259003 HTTP42858 3142 aa16.3■□□□□ 0.2
CSHL1-201ENST00000259003 MKI67P46013 3256 aaKnown RBP16.29■□□□□ 0.2
CSHL1-201ENST00000259003 AOX1Q06278 1338 aa16.29■□□□□ 0.2
CSHL1-201ENST00000259003 H7C1W4 665 aa16.29■□□□□ 0.2
CSHL1-201ENST00000259003 CASP7P55210 303 aa16.29■□□□□ 0.2
CSHL1-201ENST00000259003 FKBP1BP68106 108 aa16.29■□□□□ 0.2
CSHL1-201ENST00000259003 KIAA0825Q8IV33 1275 aa16.29■□□□□ 0.2
CSHL1-201ENST00000259003 LAMB1P07942 1786 aa16.28■□□□□ 0.2
CSHL1-201ENST00000259003 OTOFQ9HC10 1997 aa16.28■□□□□ 0.2
CSHL1-201ENST00000259003 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
CSHL1-201ENST00000259003 ITGA6P23229 1130 aa16.27■□□□□ 0.2
CSHL1-201ENST00000259003 TM4SF4P48230 202 aa16.27■□□□□ 0.2
CSHL1-201ENST00000259003 GTF2IP78347 998 aa16.27■□□□□ 0.2
CSHL1-201ENST00000259003 STRIP1Q5VSL9 837 aa16.27■□□□□ 0.2
CSHL1-201ENST00000259003 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.2
CSHL1-201ENST00000259003 CERS5Q8N5B7 392 aa16.27■□□□□ 0.2
CSHL1-201ENST00000259003 ZBED3Q96IU2 234 aaPredicted RBP16.27■□□□□ 0.2
CSHL1-201ENST00000259003 COA1Q9GZY4 146 aa16.27■□□□□ 0.2
CSHL1-201ENST00000259003 SSC5DA1L4H1 1573 aa16.26■□□□□ 0.19
CSHL1-201ENST00000259003 ZNF804BA4D1E1 1349 aa16.26■□□□□ 0.19
CSHL1-201ENST00000259003 IRS2Q9Y4H2 1338 aa16.26■□□□□ 0.19
CSHL1-201ENST00000259003 GPR25O00155 361 aa16.26■□□□□ 0.19
CSHL1-201ENST00000259003 HELBQ8NG08 1087 aaPredicted RBP16.26■□□□□ 0.19
CSHL1-201ENST00000259003 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
CSHL1-201ENST00000259003 TAF5LO75529 589 aa16.25■□□□□ 0.19
CSHL1-201ENST00000259003 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
CSHL1-201ENST00000259003 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
CSHL1-201ENST00000259003 GCKRQ14397 625 aa16.25■□□□□ 0.19
CSHL1-201ENST00000259003 ANGEL1Q9UNK9 670 aaKnown RBP16.25■□□□□ 0.19
CSHL1-201ENST00000259003 JAG2Q9Y219 1238 aa16.25■□□□□ 0.19
CSHL1-201ENST00000259003 LEMD3Q9Y2U8 911 aa16.25■□□□□ 0.19
CSHL1-201ENST00000259003 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
CSHL1-201ENST00000259003 CHRNDQ07001 517 aa16.24■□□□□ 0.19
CSHL1-201ENST00000259003 TWISTNBQ3B726 338 aaPredicted RBP16.24■□□□□ 0.19
CSHL1-201ENST00000259003 LDLRAD1Q5T700 205 aa16.24■□□□□ 0.19
CSHL1-201ENST00000259003 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
CSHL1-201ENST00000259003 OGFOD1Q8N543 542 aa16.24■□□□□ 0.19
CSHL1-201ENST00000259003 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
CSHL1-201ENST00000259003 F8W031 263 aaPredicted RBP16.23■□□□□ 0.19
CSHL1-201ENST00000259003 CSF1RP07333 972 aa16.23■□□□□ 0.19
CSHL1-201ENST00000259003 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
CSHL1-201ENST00000259003 SPRYD7Q5W111 196 aa16.23■□□□□ 0.19
CSHL1-201ENST00000259003 PLA2G12BQ9BX93 195 aa16.23■□□□□ 0.19
CSHL1-201ENST00000259003 STK31Q9BXU1 1019 aa16.23■□□□□ 0.19
CSHL1-201ENST00000259003 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
CSHL1-201ENST00000259003 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
CSHL1-201ENST00000259003 CAP1Q01518 475 aa16.22■□□□□ 0.19
CSHL1-201ENST00000259003 FLIIQ13045 1269 aa16.22■□□□□ 0.19
CSHL1-201ENST00000259003 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
CSHL1-201ENST00000259003 BRCA2P51587 3418 aa16.22■□□□□ 0.19
CSHL1-201ENST00000259003 MYO3BQ8WXR4 1341 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 CLRN2A0PK11 232 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 F6X3S4 739 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 GJA5P36382 358 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 FOXO4P98177 505 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 EPHA10Q5JZY3 1008 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 APOBEC3FQ8IUX4 373 aaKnown RBP16.21■□□□□ 0.19
CSHL1-201ENST00000259003 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
CSHL1-201ENST00000259003 MPHOSPH8Q99549 860 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 DEFB129Q9H1M3 183 aa16.21■□□□□ 0.19
CSHL1-201ENST00000259003 IGF2BP3O00425 579 aaKnown RBP eCLIP16.2■□□□□ 0.18
CSHL1-201ENST00000259003 NF2P35240 595 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms