RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 FBXW7Q969H0 707 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 PRDM10Q9NQV6 1147 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 GGA3Q9NZ52 723 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 HSPA8P11142 646 aaKnown RBP24.18■■□□□ 1.46
TM6SF1-201ENST00000258909 ZNF280AP59817 542 aaPredicted RBP24.18■■□□□ 1.46
TM6SF1-201ENST00000258909 GMLQ99445 158 aa24.18■■□□□ 1.46
TM6SF1-201ENST00000258909 CHMP3Q9Y3E7 222 aa24.18■■□□□ 1.46
TM6SF1-201ENST00000258909 USP17L8P0C7I0 530 aa24.17■■□□□ 1.46
TM6SF1-201ENST00000258909 FOXO4P98177 505 aa24.17■■□□□ 1.46
TM6SF1-201ENST00000258909 LEMD3Q9Y2U8 911 aa24.17■■□□□ 1.46
TM6SF1-201ENST00000258909 ZNF804BA4D1E1 1349 aa24.16■■□□□ 1.46
TM6SF1-201ENST00000258909 ANKRD18BA2A2Z9 1011 aa24.16■■□□□ 1.46
TM6SF1-201ENST00000258909 SCARF1Q14162 830 aa24.16■■□□□ 1.46
TM6SF1-201ENST00000258909 SLC4A10Q6U841 1118 aa24.16■■□□□ 1.46
TM6SF1-201ENST00000258909 ANKRD2Q9GZV1 360 aa24.16■■□□□ 1.46
TM6SF1-201ENST00000258909 ZNF521Q96K83 1311 aa24.16■■□□□ 1.46
TM6SF1-201ENST00000258909 ZNF609O15014 1411 aa24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 HUNKP57058 714 aa24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 CHRNDQ07001 517 aa24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 EPHA10Q5JZY3 1008 aa24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 ANGEL2Q5VTE6 544 aaKnown RBP24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 SULF1Q8IWU6 871 aa24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 HHIPL1Q96JK4 782 aa24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 MYOZ2Q9NPC6 264 aa24.15■■□□□ 1.46
TM6SF1-201ENST00000258909 SNAP23O00161 211 aa24.14■■□□□ 1.46
TM6SF1-201ENST00000258909 HELBQ8NG08 1087 aaPredicted RBP24.14■■□□□ 1.46
TM6SF1-201ENST00000258909 BEGAINQ9BUH8 593 aa24.14■■□□□ 1.46
TM6SF1-201ENST00000258909 COA1Q9GZY4 146 aa24.14■■□□□ 1.46
TM6SF1-201ENST00000258909 SCAF8Q9UPN6 1271 aaKnown RBP24.14■■□□□ 1.46
TM6SF1-201ENST00000258909 ZNF646O15015 1829 aaPredicted RBP24.14■■□□□ 1.45
TM6SF1-201ENST00000258909 TAF5LO75529 589 aa24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 MAP2K2P36507 400 aa24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 KCNJ4P48050 445 aa24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 IFIT5Q13325 482 aaKnown RBP24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 DACT2Q5SW24 774 aa24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 LMBR1LQ6UX01 489 aa24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 GBA2Q9HCG7 927 aaPredicted RBP24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 TSKSQ9UJT2 592 aa24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 GRM8O00222 908 aa24.13■■□□□ 1.45
TM6SF1-201ENST00000258909 C2orf69Q8N8R5 385 aa24.12■■□□□ 1.45
TM6SF1-201ENST00000258909 ZNF594Q96JF6 807 aaPredicted RBP24.12■■□□□ 1.45
TM6SF1-201ENST00000258909 ZIC5Q96T25 663 aa24.12■■□□□ 1.45
TM6SF1-201ENST00000258909 C9orf78Q9NZ63 289 aaPredicted RBP24.12■■□□□ 1.45
TM6SF1-201ENST00000258909 STRIP1Q5VSL9 837 aa24.11■■□□□ 1.45
TM6SF1-201ENST00000258909 CDCA5Q96FF9 252 aa24.11■■□□□ 1.45
TM6SF1-201ENST00000258909 NBPF9Q3BBW0 867 aa24.1■■□□□ 1.45
TM6SF1-201ENST00000258909 SRCIN1Q9C0H9 1055 aa24.1■■□□□ 1.45
TM6SF1-201ENST00000258909 A0A1B0GUL6 1792 aa24.09■■□□□ 1.45
TM6SF1-201ENST00000258909 TTLL5Q6EMB2 1281 aa24.09■■□□□ 1.45
TM6SF1-201ENST00000258909 ALDH1L1O75891 902 aa24.08■■□□□ 1.45
TM6SF1-201ENST00000258909 GTF2IP78347 998 aa24.08■■□□□ 1.45
TM6SF1-201ENST00000258909 OGFOD1Q8N543 542 aa24.08■■□□□ 1.45
TM6SF1-201ENST00000258909 PLIN1O60240 522 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 CCDC57Q2TAC2 916 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 RGMBQ6NW40 437 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 MRPL50Q8N5N7 158 aaKnown RBP24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 TAF7LQ5H9L4 462 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 PRAMEF18Q5VWM3 479 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 KIAA0825Q8IV33 1275 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 SUCLG2Q96I99 432 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 CD209Q9NNX6 404 aa24.07■■□□□ 1.44
TM6SF1-201ENST00000258909 MYO3BQ8WXR4 1341 aa24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 IRS2Q9Y4H2 1338 aa24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 FAM155AB1AL88 458 aaPredicted RBP24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 SASH1O94885 1247 aa24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 ZNF157P51786 506 aaPredicted RBP24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 BRPF1P55201 1214 aaPredicted RBP24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 NOGQ13253 232 aa24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 LDHAL6AQ6ZMR3 332 aa24.06■■□□□ 1.44
TM6SF1-201ENST00000258909 NBPF7P0C2Y1 421 aaPredicted RBP24.05■■□□□ 1.44
TM6SF1-201ENST00000258909 KAZALD1Q96I82 304 aa24.05■■□□□ 1.44
TM6SF1-201ENST00000258909 CNNM1Q9NRU3 951 aa24.05■■□□□ 1.44
TM6SF1-201ENST00000258909 E9PSI1 815 aa24.04■■□□□ 1.44
TM6SF1-201ENST00000258909 WNT10BO00744 389 aa24.04■■□□□ 1.44
TM6SF1-201ENST00000258909 PITPNM2Q9BZ72 1349 aa24.04■■□□□ 1.44
TM6SF1-201ENST00000258909 SSH1Q8WYL5 1049 aa24.03■■□□□ 1.44
TM6SF1-201ENST00000258909 CDCA7LQ96GN5 454 aa24.03■■□□□ 1.44
TM6SF1-201ENST00000258909 SLFN5Q08AF3 891 aa24.02■■□□□ 1.44
TM6SF1-201ENST00000258909 MOB2Q70IA6 237 aa24.02■■□□□ 1.44
TM6SF1-201ENST00000258909 JAG2Q9Y219 1238 aa24.02■■□□□ 1.44
TM6SF1-201ENST00000258909 KIF23Q02241 960 aaPredicted RBP24.01■■□□□ 1.43
TM6SF1-201ENST00000258909 C15orf52Q6ZUT6 534 aaKnown RBP24.01■■□□□ 1.43
TM6SF1-201ENST00000258909 CERS5Q8N5B7 392 aa24.01■■□□□ 1.43
TM6SF1-201ENST00000258909 CCDC102AQ96A19 550 aa24.01■■□□□ 1.43
TM6SF1-201ENST00000258909 PUS3Q9BZE2 481 aaKnown RBP24.01■■□□□ 1.43
TM6SF1-201ENST00000258909 CASP8AP2Q9UKL3 1982 aa24.01■■□□□ 1.43
TM6SF1-201ENST00000258909 ZNF804AQ7Z570 1209 aa24■■□□□ 1.43
TM6SF1-201ENST00000258909 HDAC9Q9UKV0 1011 aa24■■□□□ 1.43
TM6SF1-201ENST00000258909 CA12O43570 354 aa24■■□□□ 1.43
TM6SF1-201ENST00000258909 BICC1Q9H694 974 aaKnown RBP24■■□□□ 1.43
TM6SF1-201ENST00000258909 UTYO14607 1347 aa23.99■■□□□ 1.43
TM6SF1-201ENST00000258909 F8W031 263 aaPredicted RBP23.99■■□□□ 1.43
TM6SF1-201ENST00000258909 PTPRCP08575 1304 aa23.98■■□□□ 1.43
TM6SF1-201ENST00000258909 UBE2Q2LH0YL09 131 aa23.98■■□□□ 1.43
TM6SF1-201ENST00000258909 SLC10A3P09131 477 aa23.98■■□□□ 1.43
TM6SF1-201ENST00000258909 IL1R1P14778 569 aa23.98■■□□□ 1.43
TM6SF1-201ENST00000258909 PCDHAC2Q9Y5I4 1007 aa23.98■■□□□ 1.43
TM6SF1-201ENST00000258909 PAPPA2Q9BXP8 1791 aa23.97■■□□□ 1.43
TM6SF1-201ENST00000258909 FKBP1BP68106 108 aa23.96■■□□□ 1.43
TM6SF1-201ENST00000258909 TTLL12Q14166 644 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms