RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 ERC1Q8IUD2 1116 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 IFIT2P09913 472 aaKnown RBP10.94□□□□□ -0.66
RPA1-201ENST00000254719 TATP17735 454 aaPredicted RBP10.94□□□□□ -0.66
RPA1-201ENST00000254719 RESTQ13127 1097 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 DDX46Q7L014 1031 aaKnown RBP10.94□□□□□ -0.66
RPA1-201ENST00000254719 NOL7Q9UMY1 257 aaKnown RBP10.94□□□□□ -0.66
RPA1-201ENST00000254719 LY75O60449 1722 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 TCRBV5S4A2TA0A5A2 114 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 SNW1Q13573 536 aaKnown RBP10.93□□□□□ -0.66
RPA1-201ENST00000254719 CCDC34Q96HJ3 373 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 RIC3Q7Z5B4 369 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 G3BP1Q13283 466 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■■■□□ 14.7
RPA1-201ENST00000254719 FBXL16Q8N461 479 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 SNAP23O00161 211 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 DDX60LQ5H9U9 1706 aaKnown RBP10.93□□□□□ -0.66
RPA1-201ENST00000254719 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
RPA1-201ENST00000254719 PCDH11XQ9BZA7 1347 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 PCDH11YQ9BZA8 1340 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 ZCRB1Q8TBF4 217 aaKnown RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 ZNF384Q8TF68 577 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 RAPGEF4Q8WZA2 1011 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 PLA2G12BQ9BX93 195 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 LRRC2Q9BYS8 371 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 GJB4Q9NTQ9 266 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 LTBP1Q14766 1721 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 TRIM28Q13263 835 aaKnown RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 GORABQ5T7V8 394 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 TTC5Q8N0Z6 440 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 C17orf53Q8N3J3 647 aaPredicted RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 PUS7LQ9H0K6 701 aaKnown RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 ZNF500O60304 480 aaPredicted RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 HSPD1P10809 573 aaKnown RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 CYP19A1P11511 503 aaPredicted RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 TPM4P67936 248 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 GTF3C6Q969F1 213 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 ZNF830Q96NB3 372 aaPredicted RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 PDRG1Q9NUG6 133 aa10.92□□□□□ -0.66
RPA1-201ENST00000254719 NAP1L2Q9ULW6 460 aaPredicted RBP10.92□□□□□ -0.66
RPA1-201ENST00000254719 KBTBD3Q8NAB2 608 aa10.91□□□□□ -0.66
RPA1-201ENST00000254719 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
RPA1-201ENST00000254719 GOLPH3LQ9H4A5 285 aa10.91□□□□□ -0.66
RPA1-201ENST00000254719 MYH2Q9UKX2 1941 aa10.91□□□□□ -0.66
RPA1-201ENST00000254719 LAMB1P07942 1786 aa10.91□□□□□ -0.66
RPA1-201ENST00000254719 INTS5Q6P9B9 1019 aaKnown RBP10.91□□□□□ -0.66
RPA1-201ENST00000254719 ZBTB3Q9H5J0 574 aa10.91□□□□□ -0.66
RPA1-201ENST00000254719 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.91□□□□□ -0.66
RPA1-201ENST00000254719 ATF3P18847 181 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 MCAMP43121 646 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 NSUN7Q8NE18 718 aaKnown RBP10.9□□□□□ -0.66
RPA1-201ENST00000254719 A0A087WWV3 80 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 EVX2Q03828 476 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 DNAJC10Q8IXB1 793 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 HSD3B7Q9H2F3 369 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 INCENPQ9NQS7 918 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 BTAF1O14981 1849 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.66
RPA1-201ENST00000254719 FGFR2P21802 821 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
RPA1-201ENST00000254719 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
RPA1-201ENST00000254719 ENGASEQ8NFI3 743 aa10.9□□□□□ -0.67
RPA1-201ENST00000254719 FAM89AQ96GI7 184 aa10.9□□□□□ -0.67
RPA1-201ENST00000254719 GPR108Q9NPR9 543 aa10.9□□□□□ -0.67
RPA1-201ENST00000254719 MYH6P13533 1939 aa10.9□□□□□ -0.67
RPA1-201ENST00000254719 A0A0G2JS52 829 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 PSMA5P28066 241 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 DRC7Q8IY82 874 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 TTLL11Q8NHH1 800 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 THSD7AQ9UPZ6 1657 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 A0A1B0GUL7 405 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 CABP4P57796 275 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 GIMAP6Q6P9H5 292 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 MRVI1Q9Y6F6 885 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 CIAO1O76071 339 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 CCDC173Q0VFZ6 552 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 CARMIL3Q8ND23 1372 aa10.89□□□□□ -0.67
RPA1-201ENST00000254719 PPFIA3O75145 1194 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 NR1I2O75469 434 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 TCIRG1Q13488 830 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 CHST3Q7LGC8 479 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 GREM2Q9H772 168 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 ELP1O95163 1332 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 IRS2Q9Y4H2 1338 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 IL2RBP14784 551 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 SMC3Q9UQE7 1217 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 WDR33Q9C0J8 1336 aaKnown RBP10.88□□□□□ -0.67
RPA1-201ENST00000254719 UQCRHLA0A096LP55 91 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 UQCRHP07919 91 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 HSP90B1P14625 803 aaKnown RBP10.88□□□□□ -0.67
RPA1-201ENST00000254719 CBX1P83916 185 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 NLRP10Q86W26 655 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 CCDC191Q8NCU4 936 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 NCOA5Q9HCD5 579 aaKnown RBP10.88□□□□□ -0.67
RPA1-201ENST00000254719 PRDM4Q9UKN5 801 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 E7EWF7 191 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 PDCP20941 246 aa10.88□□□□□ -0.67
RPA1-201ENST00000254719 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms