RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.74■■□□□ 1.39
RARA-201ENST00000254066 MYCNP04198 464 aaPredicted RBP23.74■■□□□ 1.39
RARA-201ENST00000254066 TMC6Q7Z403 805 aa23.74■■□□□ 1.39
RARA-201ENST00000254066 RRP15Q9Y3B9 282 aaKnown RBP23.74■■□□□ 1.39
RARA-201ENST00000254066 PATL2C9JE40 543 aaKnown RBP23.73■■□□□ 1.39
RARA-201ENST00000254066 SASH3O75995 380 aa23.73■■□□□ 1.39
RARA-201ENST00000254066 KRT32Q14532 448 aa23.73■■□□□ 1.39
RARA-201ENST00000254066 LLPHQ9BRT6 129 aaKnown RBP23.73■■□□□ 1.39
RARA-201ENST00000254066 JCADQ9P266 1359 aa23.73■■□□□ 1.39
RARA-201ENST00000254066 RPS6KA5O75582 802 aa23.73■■□□□ 1.39
RARA-201ENST00000254066 EVCP57679 992 aa23.73■■□□□ 1.39
RARA-201ENST00000254066 XPO4Q9C0E2 1151 aaKnown RBP23.73■■□□□ 1.39
RARA-201ENST00000254066 ZNF396Q96N95 335 aaPredicted RBP23.72■■□□□ 1.39
RARA-201ENST00000254066 GOLPH3LQ9H4A5 285 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 ADAM21Q9UKJ8 722 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 PARP3Q9Y6F1 533 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 CCDC61Q9Y6R9 512 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 PLEKHG2Q9H7P9 1386 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 SOX12O15370 315 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 SEC31AO94979 1220 aaKnown RBP23.72■■□□□ 1.39
RARA-201ENST00000254066 ERC1Q8IUD2 1116 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 CARD6Q9BX69 1037 aa23.72■■□□□ 1.39
RARA-201ENST00000254066 URI1O94763 535 aaPredicted RBP23.71■■□□□ 1.39
RARA-201ENST00000254066 GTF2A1P52655 376 aaPredicted RBP23.71■■□□□ 1.39
RARA-201ENST00000254066 MTX1Q13505 466 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 MTHFSDQ2M296 383 aaKnown RBP23.71■■□□□ 1.39
RARA-201ENST00000254066 A0A1B0GUL7 405 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 GOLGA6L9A6NEM1 432 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 ZSCAN12O43309 604 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 WAPLQ7Z5K2 1190 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 RABGGTAQ92696 567 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 FUT8Q9BYC5 575 aa23.71■■□□□ 1.39
RARA-201ENST00000254066 SMC2O95347 1197 aa23.7■■□□□ 1.38
RARA-201ENST00000254066 GORABQ5T7V8 394 aa23.7■■□□□ 1.38
RARA-201ENST00000254066 TMX1Q9H3N1 280 aa23.7■■□□□ 1.38
RARA-201ENST00000254066 IFNKQ9P0W0 207 aa23.7■■□□□ 1.38
RARA-201ENST00000254066 SMARCC2Q8TAQ2 1214 aa23.7■■□□□ 1.38
RARA-201ENST00000254066 NUDT16Q96DE0 195 aaKnown RBP23.7■■□□□ 1.38
RARA-201ENST00000254066 LCMT1Q9UIC8 334 aa23.7■■□□□ 1.38
RARA-201ENST00000254066 KDRP35968 1356 aa23.69■■□□□ 1.38
RARA-201ENST00000254066 TRIM66O15016 1216 aa23.69■■□□□ 1.38
RARA-201ENST00000254066 LEKR1Q6ZMV7 388 aa23.69■■□□□ 1.38
RARA-201ENST00000254066 RSRC2Q7L4I2 434 aaKnown RBP23.69■■□□□ 1.38
RARA-201ENST00000254066 ZCCHC17Q9NP64 241 aaKnown RBP23.69■■□□□ 1.38
RARA-201ENST00000254066 MAP3K9P80192 1104 aa23.69■■□□□ 1.38
RARA-201ENST00000254066 DDX54Q8TDD1 881 aaKnown RBP23.69■■□□□ 1.38
RARA-201ENST00000254066 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
RARA-201ENST00000254066 CCDC151A5D8V7 595 aa23.68■■□□□ 1.38
RARA-201ENST00000254066 MAGEA9P43362 315 aa23.68■■□□□ 1.38
RARA-201ENST00000254066 BRD3Q15059 726 aa23.68■■□□□ 1.38
RARA-201ENST00000254066 ZRSR1Q15695 479 aaKnown RBP23.68■■□□□ 1.38
RARA-201ENST00000254066 TAOK2Q9UL54 1235 aa23.68■■□□□ 1.38
RARA-201ENST00000254066 OVOS2A0A0J9YW53 1432 aa23.68■■□□□ 1.38
RARA-201ENST00000254066 OVOS2Q6IE36 1432 aa23.68■■□□□ 1.38
RARA-201ENST00000254066 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.68■■□□□ 1.38
RARA-201ENST00000254066 NALCNQ8IZF0 1738 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 A0A1W2PQ27 194 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 A0A1W2PQ64 194 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 A0A1W2PQD8 194 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 MAP2K7O14733 419 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 IFIT2P09913 472 aaKnown RBP23.67■■□□□ 1.38
RARA-201ENST00000254066 NMIQ13287 307 aaPredicted RBP23.67■■□□□ 1.38
RARA-201ENST00000254066 FMR1NBQ8N0W7 255 aaPredicted RBP23.67■■□□□ 1.38
RARA-201ENST00000254066 MED23Q9ULK4 1368 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 PEAK1Q9H792 1746 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 IKBKBO14920 756 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 FSIP1Q8NA03 581 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 KIAA1468Q9P260 1216 aa23.67■■□□□ 1.38
RARA-201ENST00000254066 JAK2O60674 1132 aa23.66■■□□□ 1.38
RARA-201ENST00000254066 OS9Q13438 667 aaPredicted RBP23.66■■□□□ 1.38
RARA-201ENST00000254066 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
RARA-201ENST00000254066 HNRNPLLQ8WVV9 542 aaKnown RBP23.66■■□□□ 1.38
RARA-201ENST00000254066 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
RARA-201ENST00000254066 GUCY2CP25092 1073 aa23.65■■□□□ 1.38
RARA-201ENST00000254066 LMAN1P49257 510 aa23.65■■□□□ 1.38
RARA-201ENST00000254066 STK3Q13188 491 aa23.65■■□□□ 1.38
RARA-201ENST00000254066 MRPS27Q92552 414 aaKnown RBP23.65■■□□□ 1.38
RARA-201ENST00000254066 CBFA2T2O43439 604 aa23.65■■□□□ 1.38
RARA-201ENST00000254066 MYO1BO43795 1136 aa23.65■■□□□ 1.38
RARA-201ENST00000254066 MAP3K19Q56UN5 1328 aa23.65■■□□□ 1.38
RARA-201ENST00000254066 FOXO3O43524 673 aa23.64■■□□□ 1.38
RARA-201ENST00000254066 TUBB4BP68371 445 aa23.64■■□□□ 1.38
RARA-201ENST00000254066 MKRN1Q9UHC7 482 aaKnown RBP23.64■■□□□ 1.38
RARA-201ENST00000254066 USP31Q70CQ4 1352 aa23.64■■□□□ 1.38
RARA-201ENST00000254066 ADALQ6DHV7 355 aa23.64■■□□□ 1.37
RARA-201ENST00000254066 CERS3Q8IU89 383 aa23.64■■□□□ 1.37
RARA-201ENST00000254066 SYTL4Q96C24 671 aaPredicted RBP23.64■■□□□ 1.37
RARA-201ENST00000254066 FAM227BQ96M60 508 aa23.64■■□□□ 1.37
RARA-201ENST00000254066 SDF4Q9BRK5 362 aa23.64■■□□□ 1.37
RARA-201ENST00000254066 PARD6BQ9BYG5 372 aa23.64■■□□□ 1.37
RARA-201ENST00000254066 MRFAP1Q9Y605 127 aa23.64■■□□□ 1.37
RARA-201ENST00000254066 ABCC6O95255 1503 aa23.64■■□□□ 1.37
RARA-201ENST00000254066 AHDC1Q5TGY3 1603 aaPredicted RBP23.63■■□□□ 1.37
RARA-201ENST00000254066 NUTM2FA1L443 756 aa23.63■■□□□ 1.37
RARA-201ENST00000254066 SOCS7O14512 581 aa23.63■■□□□ 1.37
RARA-201ENST00000254066 NUTM2GQ5VZR2 741 aa23.63■■□□□ 1.37
RARA-201ENST00000254066 GOLGA1Q92805 767 aa23.63■■□□□ 1.37
RARA-201ENST00000254066 SIRT1Q96EB6 747 aa23.63■■□□□ 1.37
RARA-201ENST00000254066 NLRP12P59046 1061 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms