RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 A0A1B0GUL6 1792 aa13.32□□□□□ -0.28
VPS50-201ENST00000251739 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 C6orf229H3BNL8 230 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 H7C1D1 291 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 PDE8AO60658 829 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 IGKV5-2P06315 115 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 MAP2K2P36507 400 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 CCDC30Q5VVM6 783 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
VPS50-201ENST00000251739 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
VPS50-201ENST00000251739 AOC2O75106 756 aa13.3□□□□□ -0.28
VPS50-201ENST00000251739 VIL1P09327 827 aaKnown RBP13.3□□□□□ -0.28
VPS50-201ENST00000251739 CCDC152Q4G0S7 254 aa13.3□□□□□ -0.28
VPS50-201ENST00000251739 SAMD7Q7Z3H4 446 aa13.3□□□□□ -0.28
VPS50-201ENST00000251739 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
VPS50-201ENST00000251739 UFL1O94874 794 aa13.29□□□□□ -0.28
VPS50-201ENST00000251739 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
VPS50-201ENST00000251739 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
VPS50-201ENST00000251739 DOK7Q18PE1 504 aa13.29□□□□□ -0.28
VPS50-201ENST00000251739 TBC1D10BQ4KMP7 808 aaPredicted RBP13.29□□□□□ -0.28
VPS50-201ENST00000251739 KSR2Q6VAB6 950 aa13.29□□□□□ -0.28
VPS50-201ENST00000251739 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
VPS50-201ENST00000251739 TSR2Q969E8 191 aaKnown RBP13.29□□□□□ -0.28
VPS50-201ENST00000251739 MAP3K2Q9Y2U5 619 aa13.29□□□□□ -0.28
VPS50-201ENST00000251739 XDHP47989 1333 aa13.29□□□□□ -0.28
VPS50-201ENST00000251739 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
VPS50-201ENST00000251739 CTSWP56202 376 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 USP48Q86UV5 1035 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 WWC1Q8IX03 1113 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
VPS50-201ENST00000251739 GMLQ99445 158 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 ZC3H12CQ9C0D7 883 aaKnown RBP13.28□□□□□ -0.28
VPS50-201ENST00000251739 GGA1Q9UJY5 639 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 IL16Q14005 1332 aa13.28□□□□□ -0.28
VPS50-201ENST00000251739 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.28
VPS50-201ENST00000251739 ZNF280AP59817 542 aaPredicted RBP13.27□□□□□ -0.29
VPS50-201ENST00000251739 GRM1Q13255 1194 aa13.27□□□□□ -0.29
VPS50-201ENST00000251739 KRT26Q7Z3Y9 468 aa13.27□□□□□ -0.29
VPS50-201ENST00000251739 TTLL11Q8NHH1 800 aa13.27□□□□□ -0.29
VPS50-201ENST00000251739 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
VPS50-201ENST00000251739 MED23Q9ULK4 1368 aa13.27□□□□□ -0.29
VPS50-201ENST00000251739 PAPPA2Q9BXP8 1791 aa13.27□□□□□ -0.29
VPS50-201ENST00000251739 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 ADM5C9JUS6 153 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 CA12O43570 354 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 ASTN2O75129 1339 aaPredicted RBP13.26□□□□□ -0.29
VPS50-201ENST00000251739 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 G2E3Q7L622 706 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 ANKRD18AQ8IVF6 992 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 AGBL3Q8NEM8 1001 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 CCDC85AQ96PX6 553 aaPredicted RBP13.26□□□□□ -0.29
VPS50-201ENST00000251739 ZNF408Q9H9D4 720 aa13.26□□□□□ -0.29
VPS50-201ENST00000251739 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
VPS50-201ENST00000251739 FAM155AB1AL88 458 aaPredicted RBP13.25□□□□□ -0.29
VPS50-201ENST00000251739 H7C1W4 665 aa13.25□□□□□ -0.29
VPS50-201ENST00000251739 HUNKP57058 714 aa13.25□□□□□ -0.29
VPS50-201ENST00000251739 NOGQ13253 232 aa13.25□□□□□ -0.29
VPS50-201ENST00000251739 CWF19L2Q2TBE0 894 aaKnown RBP13.25□□□□□ -0.29
VPS50-201ENST00000251739 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
VPS50-201ENST00000251739 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
VPS50-201ENST00000251739 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
VPS50-201ENST00000251739 BEGAINQ9BUH8 593 aa13.25□□□□□ -0.29
VPS50-201ENST00000251739 GREM2Q9H772 168 aa13.25□□□□□ -0.29
VPS50-201ENST00000251739 GBA2Q9HCG7 927 aaPredicted RBP13.25□□□□□ -0.29
VPS50-201ENST00000251739 GGA3Q9NZ52 723 aa13.25□□□□□ -0.29
VPS50-201ENST00000251739 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 CASP7P55210 303 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 PODNQ7Z5L7 613 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 CDC5LQ99459 802 aaKnown RBP13.24□□□□□ -0.29
VPS50-201ENST00000251739 PLA2G12BQ9BX93 195 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
VPS50-201ENST00000251739 MINPP1Q9UNW1 487 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 ECM29Q5VYK3 1845 aa13.24□□□□□ -0.29
VPS50-201ENST00000251739 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
VPS50-201ENST00000251739 FLIIQ13045 1269 aa13.23□□□□□ -0.29
VPS50-201ENST00000251739 UBE3BQ7Z3V4 1068 aa13.23□□□□□ -0.29
VPS50-201ENST00000251739 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
VPS50-201ENST00000251739 TSKSQ9UJT2 592 aa13.23□□□□□ -0.29
VPS50-201ENST00000251739 PITPNM2Q9BZ72 1349 aa13.22□□□□□ -0.29
VPS50-201ENST00000251739 GCKRQ14397 625 aa13.22□□□□□ -0.29
VPS50-201ENST00000251739 DACT2Q5SW24 774 aa13.22□□□□□ -0.29
VPS50-201ENST00000251739 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
VPS50-201ENST00000251739 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
VPS50-201ENST00000251739 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
VPS50-201ENST00000251739 CDCA5Q96FF9 252 aa13.22□□□□□ -0.29
VPS50-201ENST00000251739 LAMB1P07942 1786 aa13.22□□□□□ -0.29
VPS50-201ENST00000251739 PDE4DIPQ5VU43 2346 aa13.21□□□□□ -0.29
VPS50-201ENST00000251739 USP17L3A6NCW0 530 aa13.21□□□□□ -0.29
VPS50-201ENST00000251739 USP17L4A6NCW7 530 aa13.21□□□□□ -0.29
VPS50-201ENST00000251739 CSF1RP07333 972 aa13.21□□□□□ -0.29
VPS50-201ENST00000251739 USP17L8P0C7I0 530 aa13.21□□□□□ -0.29
VPS50-201ENST00000251739 CCT4P50991 539 aaKnown RBP13.21□□□□□ -0.29
VPS50-201ENST00000251739 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms