RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 AK7Q96M32 723 aa29.91■■■□□ 2.38
TMEM55B-201ENST00000250489 SYCE3A1L190 88 aa29.9■■■□□ 2.38
TMEM55B-201ENST00000250489 PDCP20941 246 aa29.9■■■□□ 2.38
TMEM55B-201ENST00000250489 STK3Q13188 491 aa29.9■■■□□ 2.38
TMEM55B-201ENST00000250489 ITPK1Q13572 414 aa29.9■■■□□ 2.38
TMEM55B-201ENST00000250489 GTF3C6Q969F1 213 aa29.9■■■□□ 2.38
TMEM55B-201ENST00000250489 SYAP1Q96A49 352 aaPredicted RBP29.9■■■□□ 2.38
TMEM55B-201ENST00000250489 SUSD4Q5VX71 490 aa29.89■■■□□ 2.38
TMEM55B-201ENST00000250489 DHX32Q7L7V1 743 aaKnown RBP29.89■■■□□ 2.38
TMEM55B-201ENST00000250489 ZNF512BQ96KM6 892 aaPredicted RBP29.89■■■□□ 2.38
TMEM55B-201ENST00000250489 PI16Q6UXB8 463 aa29.88■■■□□ 2.37
TMEM55B-201ENST00000250489 RBSNQ9H1K0 784 aa29.88■■■□□ 2.37
TMEM55B-201ENST00000250489 PDE8BO95263 885 aa29.88■■■□□ 2.37
TMEM55B-201ENST00000250489 A0A0G2JLW4 131 aa29.87■■■□□ 2.37
TMEM55B-201ENST00000250489 CAMTA2O94983 1202 aa29.87■■■□□ 2.37
TMEM55B-201ENST00000250489 MCAMP43121 646 aa29.87■■■□□ 2.37
TMEM55B-201ENST00000250489 AKAP11Q9UKA4 1901 aa29.87■■■□□ 2.37
TMEM55B-201ENST00000250489 E7EWF7 191 aa29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 WASHC4Q2M389 1173 aa29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 APPBP2Q92624 585 aa29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 BRF1Q92994 677 aa29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 HSP90B1P14625 803 aaKnown RBP29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 EXOSC10Q01780 885 aaKnown RBP29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 DNM1Q05193 864 aaKnown RBP29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 LRRC2Q9BYS8 371 aa29.86■■■□□ 2.37
TMEM55B-201ENST00000250489 MYH7P12883 1935 aa29.85■■■□□ 2.37
TMEM55B-201ENST00000250489 FIBPO43427 364 aa29.85■■■□□ 2.37
TMEM55B-201ENST00000250489 UBE2HP62256 183 aa29.85■■■□□ 2.37
TMEM55B-201ENST00000250489 CDC37L1Q7L3B6 337 aa29.85■■■□□ 2.37
TMEM55B-201ENST00000250489 FOXP2O15409 715 aa29.84■■■□□ 2.37
TMEM55B-201ENST00000250489 PIP4K2BP78356 416 aa29.84■■■□□ 2.37
TMEM55B-201ENST00000250489 UTP14AQ9BVJ6 771 aaKnown RBP29.84■■■□□ 2.37
TMEM55B-201ENST00000250489 MYH14Q7Z406 1995 aaKnown RBP29.84■■■□□ 2.37
TMEM55B-201ENST00000250489 CSPP1Q1MSJ5 1256 aa29.84■■■□□ 2.37
TMEM55B-201ENST00000250489 AGXT2Q9BYV1 514 aa29.84■■■□□ 2.37
TMEM55B-201ENST00000250489 HCLS1P14317 486 aaPredicted RBP29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 FGD1P98174 961 aa29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 PARP10Q53GL7 1025 aa29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 TTLL5Q6EMB2 1281 aa29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 MROH5Q6ZUA9 1318 aa29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 CCDC173Q0VFZ6 552 aa29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 SMARCC1Q92922 1105 aaPredicted RBP29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 CTNNA3Q9UI47 895 aa29.83■■■□□ 2.37
TMEM55B-201ENST00000250489 ARAP2Q8WZ64 1704 aa29.82■■■□□ 2.36
TMEM55B-201ENST00000250489 TOM1O60784 492 aa29.82■■■□□ 2.36
TMEM55B-201ENST00000250489 PPP1R9BQ96SB3 815 aa29.82■■■□□ 2.36
TMEM55B-201ENST00000250489 PUS7LQ9H0K6 701 aaKnown RBP29.82■■■□□ 2.36
TMEM55B-201ENST00000250489 DDX60Q8IY21 1712 aaKnown RBP29.81■■■□□ 2.36
TMEM55B-201ENST00000250489 JAK2O60674 1132 aa29.81■■■□□ 2.36
TMEM55B-201ENST00000250489 PFKFB2O60825 505 aa29.81■■■□□ 2.36
TMEM55B-201ENST00000250489 PUM3Q15397 648 aaKnown RBP29.81■■■□□ 2.36
TMEM55B-201ENST00000250489 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.81■■■□□ 2.36
TMEM55B-201ENST00000250489 FGFR2P21802 821 aa29.81■■■□□ 2.36
TMEM55B-201ENST00000250489 SCRN1Q12765 414 aa29.81■■■□□ 2.36
TMEM55B-201ENST00000250489 FAM177BA6PVY3 158 aa29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 KCNQ2O43526 872 aa29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 PHF14O94880 888 aa29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 ARID4AP29374 1257 aaPredicted RBP29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 TTF1Q15361 905 aaPredicted RBP29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 CCDC102BQ68D86 513 aa29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 LPIN2Q92539 896 aa29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 ANP32BQ92688 251 aaKnown RBP29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 COL5A3P25940 1745 aaPredicted RBP29.8■■■□□ 2.36
TMEM55B-201ENST00000250489 PHKA1P46020 1223 aa29.79■■■□□ 2.36
TMEM55B-201ENST00000250489 ZSCAN25Q6NSZ9 544 aa29.79■■■□□ 2.36
TMEM55B-201ENST00000250489 RRAGDQ9NQL2 400 aaPredicted RBP29.79■■■□□ 2.36
TMEM55B-201ENST00000250489 ADD2P35612 726 aa29.79■■■□□ 2.36
TMEM55B-201ENST00000250489 FERMT3Q86UX7 667 aa29.79■■■□□ 2.36
TMEM55B-201ENST00000250489 LLPHQ9BRT6 129 aaKnown RBP29.79■■■□□ 2.36
TMEM55B-201ENST00000250489 LAMB2P55268 1798 aa29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 ATRNO75882 1429 aa29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 NTSR2O95665 410 aa29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 UQCRFS1P1P0C7P4 283 aa29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 APOBRQ0VD83 1088 aa29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 HELBQ8NG08 1087 aaPredicted RBP29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 SMARCC2Q8TAQ2 1214 aa29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 PIH1D3Q9NQM4 214 aaKnown RBP29.78■■■□□ 2.36
TMEM55B-201ENST00000250489 GPAA1O43292 621 aa29.77■■■□□ 2.36
TMEM55B-201ENST00000250489 IMMTQ16891 758 aaKnown RBP29.77■■■□□ 2.36
TMEM55B-201ENST00000250489 CCDC183Q5T5S1 534 aa29.77■■■□□ 2.36
TMEM55B-201ENST00000250489 NIP7Q9Y221 180 aaKnown RBP eCLIP29.77■■■□□ 2.36
TMEM55B-201ENST00000250489 FGAP02671 866 aa29.77■■■□□ 2.36
TMEM55B-201ENST00000250489 ZNF831Q5JPB2 1677 aa29.76■■■□□ 2.36
TMEM55B-201ENST00000250489 BCORQ6W2J9 1755 aa29.76■■■□□ 2.35
TMEM55B-201ENST00000250489 KRT85P78386 507 aa29.76■■■□□ 2.35
TMEM55B-201ENST00000250489 TSPY26PQ9H489 355 aa29.76■■■□□ 2.35
TMEM55B-201ENST00000250489 SEC31BQ9NQW1 1179 aa29.76■■■□□ 2.35
TMEM55B-201ENST00000250489 RTL9Q8NET4 1388 aa29.76■■■□□ 2.35
TMEM55B-201ENST00000250489 FAM98CQ17RN3 349 aaKnown RBP29.75■■■□□ 2.35
TMEM55B-201ENST00000250489 CCDC152Q4G0S7 254 aa29.75■■■□□ 2.35
TMEM55B-201ENST00000250489 SLC9C2Q5TAH2 1124 aa29.75■■■□□ 2.35
TMEM55B-201ENST00000250489 FBXL16Q8N461 479 aa29.75■■■□□ 2.35
TMEM55B-201ENST00000250489 MPHOSPH8Q99549 860 aa29.75■■■□□ 2.35
TMEM55B-201ENST00000250489 SLC5A1P13866 664 aa29.74■■■□□ 2.35
TMEM55B-201ENST00000250489 UBE3CQ15386 1083 aa29.74■■■□□ 2.35
TMEM55B-201ENST00000250489 HAND2P61296 217 aa29.73■■■□□ 2.35
TMEM55B-201ENST00000250489 FAM173BQ6P4H8 233 aa29.73■■■□□ 2.35
TMEM55B-201ENST00000250489 NSUN7Q8NE18 718 aaKnown RBP29.73■■■□□ 2.35
TMEM55B-201ENST00000250489 TRIM44Q96DX7 344 aaPredicted RBP29.73■■■□□ 2.35
TMEM55B-201ENST00000250489 CHST3Q7LGC8 479 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 480.9 ms