RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ZSCAN31Q96LW9 406 aaPredicted RBP17.55■□□□□ 0.4
MBD4-201ENST00000249910 UTP14AQ9BVJ6 771 aaKnown RBP17.55■□□□□ 0.4
MBD4-201ENST00000249910 PUS7LQ9H0K6 701 aaKnown RBP17.55■□□□□ 0.4
MBD4-201ENST00000249910 CHST3Q7LGC8 479 aa17.54■□□□□ 0.4
MBD4-201ENST00000249910 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
MBD4-201ENST00000249910 GADD45BO75293 160 aaPredicted RBP17.54■□□□□ 0.4
MBD4-201ENST00000249910 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
MBD4-201ENST00000249910 PHKA1P46020 1223 aa17.54■□□□□ 0.4
MBD4-201ENST00000249910 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
MBD4-201ENST00000249910 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 Q6ZUG5 572 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 NUP98P52948 1817 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 BCL9LQ86UU0 1499 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 NRAPQ86VF7 1730 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 VPS37CA5D8V6 355 aaPredicted RBP17.53■□□□□ 0.4
MBD4-201ENST00000249910 HAND2P61296 217 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 ZSCAN23Q3MJ62 389 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 TMEM63CQ9P1W3 806 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 CNPY2Q9Y2B0 182 aa17.53■□□□□ 0.4
MBD4-201ENST00000249910 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
MBD4-201ENST00000249910 MRE11P49959 708 aa17.52■□□□□ 0.4
MBD4-201ENST00000249910 KRT32Q14532 448 aa17.52■□□□□ 0.4
MBD4-201ENST00000249910 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
MBD4-201ENST00000249910 USP48Q86UV5 1035 aa17.52■□□□□ 0.4
MBD4-201ENST00000249910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.52■□□□□ 0.4
MBD4-201ENST00000249910 BRF1Q92994 677 aa17.52■□□□□ 0.4
MBD4-201ENST00000249910 MPHOSPH8Q99549 860 aa17.52■□□□□ 0.4
MBD4-201ENST00000249910 FOXP2O15409 715 aa17.52■□□□□ 0.39
MBD4-201ENST00000249910 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
MBD4-201ENST00000249910 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
MBD4-201ENST00000249910 DSCC1Q9BVC3 393 aa17.51■□□□□ 0.39
MBD4-201ENST00000249910 MTMR6Q9Y217 621 aa17.51■□□□□ 0.39
MBD4-201ENST00000249910 F13A1P00488 732 aa17.5■□□□□ 0.39
MBD4-201ENST00000249910 ANKRD1Q15327 319 aa17.5■□□□□ 0.39
MBD4-201ENST00000249910 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
MBD4-201ENST00000249910 WTIPA6NIX2 430 aaPredicted RBP17.5■□□□□ 0.39
MBD4-201ENST00000249910 NTSR2O95665 410 aa17.5■□□□□ 0.39
MBD4-201ENST00000249910 HSP90B1P14625 803 aaKnown RBP17.5■□□□□ 0.39
MBD4-201ENST00000249910 VPS72Q15906 364 aa17.5■□□□□ 0.39
MBD4-201ENST00000249910 SLC9C2Q5TAH2 1124 aa17.5■□□□□ 0.39
MBD4-201ENST00000249910 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
MBD4-201ENST00000249910 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
MBD4-201ENST00000249910 USP21Q9UK80 565 aa17.5■□□□□ 0.39
MBD4-201ENST00000249910 E7EWF7 191 aa17.49■□□□□ 0.39
MBD4-201ENST00000249910 JAK2O60674 1132 aa17.49■□□□□ 0.39
MBD4-201ENST00000249910 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
MBD4-201ENST00000249910 FIBPO43427 364 aa17.49■□□□□ 0.39
MBD4-201ENST00000249910 FGAP02671 866 aa17.49■□□□□ 0.39
MBD4-201ENST00000249910 PIH1D3Q9NQM4 214 aaKnown RBP17.49■□□□□ 0.39
MBD4-201ENST00000249910 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
MBD4-201ENST00000249910 PUM3Q15397 648 aaKnown RBP17.48■□□□□ 0.39
MBD4-201ENST00000249910 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
MBD4-201ENST00000249910 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
MBD4-201ENST00000249910 WNK3Q9BYP7 1800 aa17.48■□□□□ 0.39
MBD4-201ENST00000249910 TCHHQ07283 1943 aa17.48■□□□□ 0.39
MBD4-201ENST00000249910 SYCE3A1L190 88 aa17.48■□□□□ 0.39
MBD4-201ENST00000249910 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
MBD4-201ENST00000249910 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
MBD4-201ENST00000249910 NAP1L2Q9ULW6 460 aaPredicted RBP17.48■□□□□ 0.39
MBD4-201ENST00000249910 GPAA1O43292 621 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 DHX32Q7L7V1 743 aaKnown RBP17.47■□□□□ 0.39
MBD4-201ENST00000249910 LPIN2Q92539 896 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 GPHNQ9NQX3 736 aaPredicted RBP17.47■□□□□ 0.39
MBD4-201ENST00000249910 FGFR2P21802 821 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 APOBRQ0VD83 1088 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 CCDC152Q4G0S7 254 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 FNBP4Q8N3X1 1017 aaPredicted RBP17.47■□□□□ 0.39
MBD4-201ENST00000249910 APPBP2Q92624 585 aa17.47■□□□□ 0.39
MBD4-201ENST00000249910 BCAMP50895 628 aa17.46■□□□□ 0.39
MBD4-201ENST00000249910 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
MBD4-201ENST00000249910 ALDH8A1Q9H2A2 487 aaPredicted RBP17.46■□□□□ 0.39
MBD4-201ENST00000249910 WWC3Q9ULE0 1092 aa17.46■□□□□ 0.39
MBD4-201ENST00000249910 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
MBD4-201ENST00000249910 MROH5Q6ZUA9 1318 aa17.46■□□□□ 0.39
MBD4-201ENST00000249910 ZFYP08048 801 aaPredicted RBP17.46■□□□□ 0.39
MBD4-201ENST00000249910 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
MBD4-201ENST00000249910 SCRN1Q12765 414 aa17.46■□□□□ 0.39
MBD4-201ENST00000249910 SRP68Q9UHB9 627 aaKnown RBP17.46■□□□□ 0.39
MBD4-201ENST00000249910 RASGRF1Q13972 1273 aa17.45■□□□□ 0.38
MBD4-201ENST00000249910 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
MBD4-201ENST00000249910 DENND2AQ9ULE3 1009 aa17.45■□□□□ 0.38
MBD4-201ENST00000249910 LRRFIP1Q32MZ4 808 aaKnown RBP17.45■□□□□ 0.38
MBD4-201ENST00000249910 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
MBD4-201ENST00000249910 ADD2P35612 726 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
MBD4-201ENST00000249910 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
MBD4-201ENST00000249910 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 AK7Q96M32 723 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 ZNF652Q9Y2D9 606 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 ZNF532Q9HCE3 1301 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 APPP05067 770 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
MBD4-201ENST00000249910 ZNF445P59923 1031 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 CHRNDQ07001 517 aa17.44■□□□□ 0.38
MBD4-201ENST00000249910 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.44■□□□□ 0.385e-6■■■■■ 34.6
MBD4-201ENST00000249910 FOSBP53539 338 aa17.43■□□□□ 0.38
MBD4-201ENST00000249910 SPATA5Q8NB90 893 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms