RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZNF609O15014 1411 aa30.4■■■□□ 2.46
SDF2L1-201ENST00000248958 TXNRD3Q86VQ6 643 aa30.4■■■□□ 2.46
SDF2L1-201ENST00000248958 KCNQ5Q9NR82 932 aa30.4■■■□□ 2.46
SDF2L1-201ENST00000248958 RCAN3Q9UKA8 241 aa30.4■■■□□ 2.46
SDF2L1-201ENST00000248958 USP17L3A6NCW0 530 aa30.39■■■□□ 2.46
SDF2L1-201ENST00000248958 USP17L4A6NCW7 530 aa30.39■■■□□ 2.46
SDF2L1-201ENST00000248958 H7C1D1 291 aa30.39■■■□□ 2.46
SDF2L1-201ENST00000248958 USP17L1Q7RTZ2 530 aa30.39■■■□□ 2.46
SDF2L1-201ENST00000248958 CNOT7Q9UIV1 285 aaKnown RBP30.39■■■□□ 2.46
SDF2L1-201ENST00000248958 CLEC11AQ9Y240 323 aa30.39■■■□□ 2.46
SDF2L1-201ENST00000248958 GNAI2P04899 355 aa30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 POTEIP0CG38 1075 aa30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 POTEJP0CG39 1038 aa30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 PTPN12Q05209 780 aaKnown RBP30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 LRRC24Q50LG9 513 aa30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 AGBL3Q8NEM8 1001 aa30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 ZBTB12Q9Y330 459 aaPredicted RBP30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 IRS2Q9Y4H2 1338 aa30.38■■■□□ 2.45
SDF2L1-201ENST00000248958 EYA2O00167 538 aa30.37■■■□□ 2.45
SDF2L1-201ENST00000248958 METTL24Q5JXM2 366 aa30.37■■■□□ 2.45
SDF2L1-201ENST00000248958 RSBN1LQ6PCB5 846 aaPredicted RBP30.37■■■□□ 2.45
SDF2L1-201ENST00000248958 ZNF804AQ7Z570 1209 aa30.37■■■□□ 2.45
SDF2L1-201ENST00000248958 KLHDC4Q8TBB5 520 aa30.37■■■□□ 2.45
SDF2L1-201ENST00000248958 KLRK1P26718 216 aa30.36■■■□□ 2.45
SDF2L1-201ENST00000248958 APLP1P51693 650 aa30.36■■■□□ 2.45
SDF2L1-201ENST00000248958 MTX1Q13505 466 aa30.36■■■□□ 2.45
SDF2L1-201ENST00000248958 CD209Q9NNX6 404 aa30.36■■■□□ 2.45
SDF2L1-201ENST00000248958 SNAP23O00161 211 aa30.35■■■□□ 2.45
SDF2L1-201ENST00000248958 PDE8BO95263 885 aa30.35■■■□□ 2.45
SDF2L1-201ENST00000248958 STRIP1Q5VSL9 837 aa30.35■■■□□ 2.45
SDF2L1-201ENST00000248958 ITPRIPQ8IWB1 547 aa30.35■■■□□ 2.45
SDF2L1-201ENST00000248958 MICALL2Q8IY33 904 aa30.35■■■□□ 2.45
SDF2L1-201ENST00000248958 MYO3BQ8WXR4 1341 aa30.34■■■□□ 2.45
SDF2L1-201ENST00000248958 CIAO1O76071 339 aa30.34■■■□□ 2.45
SDF2L1-201ENST00000248958 VGLL2Q8N8G2 317 aa30.33■■■□□ 2.45
SDF2L1-201ENST00000248958 COPRSQ9NQ92 184 aa30.33■■■□□ 2.45
SDF2L1-201ENST00000248958 ZNF646O15015 1829 aaPredicted RBP30.32■■■□□ 2.44
SDF2L1-201ENST00000248958 RLBP1P12271 317 aa30.32■■■□□ 2.44
SDF2L1-201ENST00000248958 SRGAP3O43295 1099 aa30.31■■■□□ 2.44
SDF2L1-201ENST00000248958 IL1R1P14778 569 aa30.31■■■□□ 2.44
SDF2L1-201ENST00000248958 TTLL5Q6EMB2 1281 aa30.31■■■□□ 2.44
SDF2L1-201ENST00000248958 ZC3H15Q8WU90 426 aaKnown RBP30.31■■■□□ 2.44
SDF2L1-201ENST00000248958 MMP14P50281 582 aa30.3■■■□□ 2.44
SDF2L1-201ENST00000248958 DACT2Q5SW24 774 aa30.3■■■□□ 2.44
SDF2L1-201ENST00000248958 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.3■■■□□ 2.44
SDF2L1-201ENST00000248958 ZBTB7BO15156 539 aaPredicted RBP30.29■■■□□ 2.44
SDF2L1-201ENST00000248958 IL15P40933 162 aaPredicted RBP30.29■■■□□ 2.44
SDF2L1-201ENST00000248958 ATG9AQ7Z3C6 839 aa30.29■■■□□ 2.44
SDF2L1-201ENST00000248958 CNTROBQ8N137 903 aa30.29■■■□□ 2.44
SDF2L1-201ENST00000248958 FBXW7Q969H0 707 aa30.29■■■□□ 2.44
SDF2L1-201ENST00000248958 GMLQ99445 158 aa30.29■■■□□ 2.44
SDF2L1-201ENST00000248958 HIBADHP31937 336 aaKnown RBP30.28■■■□□ 2.44
SDF2L1-201ENST00000248958 PUM3Q15397 648 aaKnown RBP30.28■■■□□ 2.44
SDF2L1-201ENST00000248958 PGAP2Q9UHJ9 254 aa30.28■■■□□ 2.44
SDF2L1-201ENST00000248958 IFIT1P09914 478 aaKnown RBP30.27■■■□□ 2.44
SDF2L1-201ENST00000248958 GTF2IP78347 998 aa30.27■■■□□ 2.44
SDF2L1-201ENST00000248958 CAVIN4Q5BKX8 364 aa30.27■■■□□ 2.44
SDF2L1-201ENST00000248958 SIL1Q9H173 461 aa30.27■■■□□ 2.44
SDF2L1-201ENST00000248958 CEP126Q9P2H0 1117 aa30.27■■■□□ 2.44
SDF2L1-201ENST00000248958 PASKQ96RG2 1323 aa30.26■■■□□ 2.44
SDF2L1-201ENST00000248958 SHTN1A0MZ66 631 aa30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 ITGBL1O95965 494 aaPredicted RBP30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 USP17L8P0C7I0 530 aa30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 ZNF280AP59817 542 aaPredicted RBP30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 MAP1SQ66K74 1059 aaPredicted RBP30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 TRPM4Q8TD43 1214 aa30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 PANK1Q8TE04 598 aa30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 FAM84BQ96KN1 310 aaPredicted RBP30.26■■■□□ 2.43
SDF2L1-201ENST00000248958 FGFR2P21802 821 aa30.25■■■□□ 2.43
SDF2L1-201ENST00000248958 FKBP1AP62942 108 aaKnown RBP30.25■■■□□ 2.43
SDF2L1-201ENST00000248958 SAMD7Q7Z3H4 446 aa30.25■■■□□ 2.43
SDF2L1-201ENST00000248958 VPS37DQ86XT2 251 aa30.25■■■□□ 2.43
SDF2L1-201ENST00000248958 TDRD7Q8NHU6 1098 aaKnown RBP30.25■■■□□ 2.43
SDF2L1-201ENST00000248958 LPIN2Q92539 896 aa30.25■■■□□ 2.43
SDF2L1-201ENST00000248958 PA2G4Q9UQ80 394 aaKnown RBP30.25■■■□□ 2.43
SDF2L1-201ENST00000248958 SASH1O94885 1247 aa30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 SLC5A1P13866 664 aa30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 GYG1P46976 350 aa30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 HIRAP54198 1017 aaPredicted RBP30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 KIF4BQ2VIQ3 1234 aa30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 OGFOD1Q8N543 542 aa30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 YTHDC1Q96MU7 727 aaKnown RBP30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 CHMP4BQ9H444 224 aaKnown RBP30.24■■■□□ 2.43
SDF2L1-201ENST00000248958 MVPQ14764 893 aaKnown RBP30.23■■■□□ 2.43
SDF2L1-201ENST00000248958 TBC1D10BQ4KMP7 808 aaPredicted RBP30.23■■■□□ 2.43
SDF2L1-201ENST00000248958 FBXO33Q7Z6M2 555 aa30.23■■■□□ 2.43
SDF2L1-201ENST00000248958 DDX19BQ9UMR2 479 aa30.23■■■□□ 2.43
SDF2L1-201ENST00000248958 ATP8B2P98198 1209 aa30.22■■■□□ 2.43
SDF2L1-201ENST00000248958 HDAC9Q9UKV0 1011 aa30.22■■■□□ 2.43
SDF2L1-201ENST00000248958 FAM205AQ6ZU69 1335 aa30.22■■■□□ 2.43
SDF2L1-201ENST00000248958 PNMA6EA0A0J9YXQ4 647 aa30.21■■■□□ 2.43
SDF2L1-201ENST00000248958 PDE3AQ14432 1141 aa30.21■■■□□ 2.43
SDF2L1-201ENST00000248958 RBM26Q5T8P6 1007 aaKnown RBP30.21■■■□□ 2.43
SDF2L1-201ENST00000248958 MXD3Q9BW11 206 aa30.2■■■□□ 2.43
SDF2L1-201ENST00000248958 MYOZ2Q9NPC6 264 aa30.2■■■□□ 2.43
SDF2L1-201ENST00000248958 POLA2Q14181 598 aa30.19■■■□□ 2.42
SDF2L1-201ENST00000248958 ATP2B3Q16720 1220 aa30.19■■■□□ 2.42
SDF2L1-201ENST00000248958 G3BP1Q13283 466 aaKnown RBP eCLIP30.18■■■□□ 2.42
SDF2L1-201ENST00000248958 CDC37L1Q7L3B6 337 aa30.18■■■□□ 2.42
SDF2L1-201ENST00000248958 SSH3Q8TE77 659 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms