RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 C8orf37Q96NL8 207 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 BAG3O95817 575 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 TDRD12Q587J7 1177 aaKnown RBP13.01□□□□□ -0.33
FAM78A-201ENST00000247295 FAM227BQ96M60 508 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 RTN1Q16799 776 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 SPTY2D1Q68D10 685 aaPredicted RBP13□□□□□ -0.33
FAM78A-201ENST00000247295 NAA16Q6N069 864 aaPredicted RBP13□□□□□ -0.33
FAM78A-201ENST00000247295 SETDB2Q96T68 719 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 TCP11L1Q9NUJ3 509 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 NPC1L1Q9UHC9 1359 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
FAM78A-201ENST00000247295 KIF5BP33176 963 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 MATR3P43243 847 aaKnown RBP eCLIP13□□□□□ -0.33
FAM78A-201ENST00000247295 MTIF2P46199 727 aaKnown RBP13□□□□□ -0.33
FAM78A-201ENST00000247295 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
FAM78A-201ENST00000247295 LDHCP07864 332 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 DMTNQ08495 405 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 SPA17Q15506 151 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 CTR9Q6PD62 1173 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 VPS18Q9P253 973 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 SSR1P43307 286 aaKnown RBP13□□□□□ -0.33
FAM78A-201ENST00000247295 GSDMDP57764 484 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 FKBP15Q5T1M5 1219 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 ESR2Q92731 530 aa13□□□□□ -0.33
FAM78A-201ENST00000247295 CRNKL1Q9BZJ0 848 aaKnown RBP13□□□□□ -0.33
FAM78A-201ENST00000247295 IFIT1BQ5T764 474 aaKnown RBP12.99□□□□□ -0.33
FAM78A-201ENST00000247295 TCERG1LQ5VWI1 586 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 MRPS27Q92552 414 aaKnown RBP12.99□□□□□ -0.33
FAM78A-201ENST00000247295 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 KCNQ3O43525 872 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 TMEM266Q2M3C6 531 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 LUZP1Q86V48 1076 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 RAB34Q9BZG1 259 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 MYO6Q9UM54 1294 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 NEFHP12036 1026 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 GABPB1Q06547 395 aaPredicted RBP12.99□□□□□ -0.33
FAM78A-201ENST00000247295 SYT10Q6XYQ8 523 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 AOPEPQ8N6M6 819 aa12.99□□□□□ -0.33
FAM78A-201ENST00000247295 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
FAM78A-201ENST00000247295 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
FAM78A-201ENST00000247295 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 RNF113AO15541 343 aaKnown RBP12.98□□□□□ -0.33
FAM78A-201ENST00000247295 IVLP07476 585 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 MAGEB6Q8N7X4 407 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
FAM78A-201ENST00000247295 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 RNF123Q5XPI4 1314 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 A0A1B0GUL7 405 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 CEP57Q86XR8 500 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 TAF4BQ92750 862 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 N4BP3O15049 544 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 LTKP29376 864 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 NF2P35240 595 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 ELF2Q15723 593 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 RUFY3Q7L099 469 aa12.98□□□□□ -0.33
FAM78A-201ENST00000247295 DHX32Q7L7V1 743 aaKnown RBP12.98□□□□□ -0.33
FAM78A-201ENST00000247295 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 PICALMQ13492 652 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 MAP9Q49MG5 647 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 NCOA5Q9HCD5 579 aaKnown RBP12.97□□□□□ -0.33
FAM78A-201ENST00000247295 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
FAM78A-201ENST00000247295 UBASH3AP57075 661 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
FAM78A-201ENST00000247295 KRT23Q9C075 422 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 SPTLC2O15270 562 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 TYRO3Q06418 890 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 PAF1Q8N7H5 531 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 KCNG4Q8TDN1 519 aa12.97□□□□□ -0.33
FAM78A-201ENST00000247295 ERLIN2O94905 339 aa12.96□□□□□ -0.33
FAM78A-201ENST00000247295 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.33
FAM78A-201ENST00000247295 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
FAM78A-201ENST00000247295 ATP7AQ04656 1500 aa12.96□□□□□ -0.33
FAM78A-201ENST00000247295 ZMYM4Q5VZL5 1548 aa12.96□□□□□ -0.33
FAM78A-201ENST00000247295 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
FAM78A-201ENST00000247295 CCDC24Q8N4L8 307 aa12.96□□□□□ -0.33
FAM78A-201ENST00000247295 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
FAM78A-201ENST00000247295 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
FAM78A-201ENST00000247295 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
FAM78A-201ENST00000247295 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.34
FAM78A-201ENST00000247295 FSD2A1L4K1 749 aa12.95□□□□□ -0.34
FAM78A-201ENST00000247295 ZNF445P59923 1031 aa12.95□□□□□ -0.34
FAM78A-201ENST00000247295 DHX58Q96C10 678 aa12.95□□□□□ -0.34
FAM78A-201ENST00000247295 CALML4Q96GE6 196 aa12.95□□□□□ -0.34
FAM78A-201ENST00000247295 TSG101Q99816 390 aa12.95□□□□□ -0.34
FAM78A-201ENST00000247295 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
FAM78A-201ENST00000247295 MCM9Q9NXL9 1143 aa12.95□□□□□ -0.34
FAM78A-201ENST00000247295 CCDC40Q4G0X9 1142 aa12.95□□□□□ -0.34
FAM78A-201ENST00000247295 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms