RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 EIF3JO75822 258 aaKnown RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 SPTLC3Q9NUV7 552 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 IQSEC3Q9UPP2 1182 aaPredicted RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 CDK12Q9NYV4 1490 aaPredicted RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 CHMLP26374 656 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 LMAN1P49257 510 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 F8W031 263 aaPredicted RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 TFCP2Q12800 502 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 INTS4Q96HW7 963 aaKnown RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.66□□□□□ -0.382e-8■■□□□ 12.3
COPA-201ENST00000241704 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 NBPF7P0C2Y1 421 aaPredicted RBP12.65□□□□□ -0.38
COPA-201ENST00000241704 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
COPA-201ENST00000241704 ANKARQ7Z5J8 1434 aa12.65□□□□□ -0.38
COPA-201ENST00000241704 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
COPA-201ENST00000241704 IVLP07476 585 aa12.65□□□□□ -0.38
COPA-201ENST00000241704 BRPF1P55201 1214 aaPredicted RBP12.65□□□□□ -0.38
COPA-201ENST00000241704 C8orf76Q96K31 380 aa12.65□□□□□ -0.38
COPA-201ENST00000241704 PYCARDQ9ULZ3 195 aa12.65□□□□□ -0.38
COPA-201ENST00000241704 SETBP1Q9Y6X0 1596 aa12.65□□□□□ -0.38
COPA-201ENST00000241704 IFIT3O14879 490 aaKnown RBP12.65□□□□□ -0.38
COPA-201ENST00000241704 PAG1Q9NWQ8 432 aa12.65□□□□□ -0.38
COPA-201ENST00000241704 SLC12A7Q9Y666 1083 aa12.65□□□□□ -0.38
COPA-201ENST00000241704 A0A1B0GUL7 405 aa12.65□□□□□ -0.39
COPA-201ENST00000241704 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.39
COPA-201ENST00000241704 A1BGP04217 495 aa12.65□□□□□ -0.39
COPA-201ENST00000241704 CHMP4BP1P59074 171 aa12.65□□□□□ -0.39
COPA-201ENST00000241704 NCBP1Q09161 790 aaKnown RBP12.65□□□□□ -0.39
COPA-201ENST00000241704 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.39
COPA-201ENST00000241704 CNBD1Q8NA66 436 aa12.65□□□□□ -0.39
COPA-201ENST00000241704 DIP2CQ9Y2E4 1556 aa12.65□□□□□ -0.39
COPA-201ENST00000241704 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 STX6O43752 255 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 ANKRD7Q92527 254 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 CEP152O94986 1710 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 KCNQ3O43525 872 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 GJB2P29033 226 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 NMIQ13287 307 aaPredicted RBP12.64□□□□□ -0.39
COPA-201ENST00000241704 OTUD7AQ8TE49 926 aaPredicted RBP12.64□□□□□ -0.39
COPA-201ENST00000241704 GOLGA8BA8MQT2 603 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
COPA-201ENST00000241704 RDXP35241 583 aaKnown RBP12.64□□□□□ -0.39
COPA-201ENST00000241704 HAND2P61296 217 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 GCKRQ14397 625 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 ELF2Q15723 593 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 SMC2O95347 1197 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 BRD1O95696 1058 aa12.64□□□□□ -0.39
COPA-201ENST00000241704 ABCA6Q8N139 1617 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 SKILP12757 684 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 GSTO1P78417 241 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 CKAP2LQ8IYA6 745 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 TMX1Q9H3N1 280 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 BMP2KQ9NSY1 1161 aaPredicted RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 AOX1Q06278 1338 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 EYA2O00167 538 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 ODF2Q5BJF6 829 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 ERCC4Q92889 916 aaPredicted RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 FAM89AQ96GI7 184 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 EYA3Q99504 573 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
COPA-201ENST00000241704 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 TRPC5Q9UL62 973 aaPredicted RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 PPRC1Q5VV67 1664 aaKnown RBP12.63□□□□□ -0.39
COPA-201ENST00000241704 ZNF165P49910 485 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
COPA-201ENST00000241704 RAD50Q92878 1312 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 ERLIN1O75477 346 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 IBSPP21815 317 aaPredicted RBP12.62□□□□□ -0.39
COPA-201ENST00000241704 NF2P35240 595 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 CCDC82Q8N4S0 544 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 SUCLG2Q96I99 432 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 H0YHG0 523 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 CAVIN2O95810 425 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 GSDMDP57764 484 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 SLC9C2Q5TAH2 1124 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 ZNF804AQ7Z570 1209 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 GOLGA8AA7E2F4 631 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 PDE4BQ07343 736 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 MFSD6Q6ZSS7 791 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.62□□□□□ -0.39
COPA-201ENST00000241704 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 BRF1Q92994 677 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
COPA-201ENST00000241704 USP16Q9Y5T5 823 aa12.62□□□□□ -0.39
COPA-201ENST00000241704 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 TNIP1Q15025 636 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 CRNKL1Q9BZJ0 848 aaKnown RBP12.61□□□□□ -0.39
COPA-201ENST00000241704 PATL2C9JE40 543 aaKnown RBP12.61□□□□□ -0.39
COPA-201ENST00000241704 ARHGAP29Q52LW3 1261 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 ZFYVE27Q5T4F4 411 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms