RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 LARGE1O95461 756 aa19.11■□□□□ 0.65
ITGA4-201ENST00000233573 RFC4P35249 363 aa19.11■□□□□ 0.65
ITGA4-201ENST00000233573 SCARF1Q14162 830 aa19.11■□□□□ 0.65
ITGA4-201ENST00000233573 TTC39AQ5SRH9 613 aa19.11■□□□□ 0.65
ITGA4-201ENST00000233573 TRAPPC3LQ5T215 181 aa19.11■□□□□ 0.65
ITGA4-201ENST00000233573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.1■□□□□ 0.65
ITGA4-201ENST00000233573 RNF113AO15541 343 aaKnown RBP19.1■□□□□ 0.65
ITGA4-201ENST00000233573 PDE8BO95263 885 aa19.1■□□□□ 0.65
ITGA4-201ENST00000233573 TXNRD1Q16881 649 aa19.1■□□□□ 0.65
ITGA4-201ENST00000233573 SLC27A3Q5K4L6 730 aa19.1■□□□□ 0.65
ITGA4-201ENST00000233573 CCDC24Q8N4L8 307 aa19.1■□□□□ 0.65
ITGA4-201ENST00000233573 ZNF512BQ96KM6 892 aaPredicted RBP19.1■□□□□ 0.65
ITGA4-201ENST00000233573 LARP6Q9BRS8 491 aaKnown RBP19.1■□□□□ 0.65
ITGA4-201ENST00000233573 CNNM1Q9NRU3 951 aa19.1■□□□□ 0.65
ITGA4-201ENST00000233573 U3KPZ7 1027 aaPredicted RBP19.1■□□□□ 0.65
ITGA4-201ENST00000233573 COL24A1Q17RW2 1714 aa19.1■□□□□ 0.65
ITGA4-201ENST00000233573 SKOR2Q2VWA4 1001 aaPredicted RBP19.1■□□□□ 0.65
ITGA4-201ENST00000233573 FBXO41Q8TF61 875 aa19.1■□□□□ 0.65
ITGA4-201ENST00000233573 RTL9Q8NET4 1388 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 MYH7P12883 1935 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 GORABQ5T7V8 394 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 ZSCAN31Q96LW9 406 aaPredicted RBP19.09■□□□□ 0.65
ITGA4-201ENST00000233573 SETDB2Q96T68 719 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 MAST3O60307 1309 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 GOLGA6L22H0YM25 854 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 RPS6KB1P23443 525 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 ST3GAL1Q11201 340 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 DSCC1Q9BVC3 393 aa19.09■□□□□ 0.65
ITGA4-201ENST00000233573 APBA3O96018 575 aa19.08■□□□□ 0.64
ITGA4-201ENST00000233573 CYP21A2P08686 494 aa19.08■□□□□ 0.64
ITGA4-201ENST00000233573 FGFR2P21802 821 aa19.08■□□□□ 0.64
ITGA4-201ENST00000233573 FKBP4Q02790 459 aaKnown RBP eCLIP19.08■□□□□ 0.64
ITGA4-201ENST00000233573 BLOC1S2Q6QNY1 142 aa19.08■□□□□ 0.64
ITGA4-201ENST00000233573 SH2B1Q9NRF2 756 aaPredicted RBP19.08■□□□□ 0.64
ITGA4-201ENST00000233573 MROH5Q6ZUA9 1318 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 TAF1P21675 1872 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 RGL2O15211 777 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 ZAP70P43403 619 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 KRT32Q14532 448 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 CCDC152Q4G0S7 254 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 GTF2E1P29083 439 aaPredicted RBP19.07■□□□□ 0.64
ITGA4-201ENST00000233573 MCAMP43121 646 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 ME3Q16798 604 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 MCTP1Q6DN14 999 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 NBPF5PQ86XG9 351 aaPredicted RBP19.07■□□□□ 0.64
ITGA4-201ENST00000233573 LMBRD1Q9NUN5 540 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 TPCN1Q9ULQ1 816 aa19.07■□□□□ 0.64
ITGA4-201ENST00000233573 LAMA4Q16363 1823 aa19.06■□□□□ 0.64
ITGA4-201ENST00000233573 M0R2C6 588 aa19.06■□□□□ 0.64
ITGA4-201ENST00000233573 PI16Q6UXB8 463 aa19.06■□□□□ 0.64
ITGA4-201ENST00000233573 HELBQ8NG08 1087 aaPredicted RBP19.06■□□□□ 0.64
ITGA4-201ENST00000233573 OSBP2Q969R2 916 aa19.06■□□□□ 0.64
ITGA4-201ENST00000233573 GZF1Q9H116 711 aaPredicted RBP19.06■□□□□ 0.64
ITGA4-201ENST00000233573 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.06■□□□□ 0.64
ITGA4-201ENST00000233573 FSD2A1L4K1 749 aa19.05■□□□□ 0.64
ITGA4-201ENST00000233573 TOB2Q14106 344 aaPredicted RBP19.05■□□□□ 0.64
ITGA4-201ENST00000233573 ZFYP08048 801 aaPredicted RBP19.05■□□□□ 0.64
ITGA4-201ENST00000233573 HSPD1P10809 573 aaKnown RBP19.05■□□□□ 0.64
ITGA4-201ENST00000233573 PUM3Q15397 648 aaKnown RBP19.05■□□□□ 0.64
ITGA4-201ENST00000233573 TNS1Q9HBL0 1735 aaKnown RBP19.05■□□□□ 0.64
ITGA4-201ENST00000233573 HSP90B1P14625 803 aaKnown RBP19.04■□□□□ 0.64
ITGA4-201ENST00000233573 ARID4AP29374 1257 aaPredicted RBP19.04■□□□□ 0.64
ITGA4-201ENST00000233573 NFIXQ14938 502 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 KLHL40Q2TBA0 621 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 LRRFIP1Q32MZ4 808 aaKnown RBP19.04■□□□□ 0.64
ITGA4-201ENST00000233573 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 NEK1Q96PY6 1258 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 MYO5AQ9Y4I1 1855 aaKnown RBP19.04■□□□□ 0.64
ITGA4-201ENST00000233573 ADRA2BP18089 450 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 ZNF827Q17R98 1081 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 STOX1Q6ZVD7 989 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 CCDC83Q8IWF9 413 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 LPIN2Q92539 896 aa19.04■□□□□ 0.64
ITGA4-201ENST00000233573 SNAP23O00161 211 aa19.03■□□□□ 0.64
ITGA4-201ENST00000233573 FOXP2O15409 715 aa19.03■□□□□ 0.64
ITGA4-201ENST00000233573 CCDC102BQ68D86 513 aa19.03■□□□□ 0.64
ITGA4-201ENST00000233573 TCEANC2Q96MN5 208 aa19.03■□□□□ 0.64
ITGA4-201ENST00000233573 NYXQ9GZU5 481 aa19.03■□□□□ 0.64
ITGA4-201ENST00000233573 WDR33Q9C0J8 1336 aaKnown RBP19.03■□□□□ 0.64
ITGA4-201ENST00000233573 GYS1P13807 737 aa19.02■□□□□ 0.64
ITGA4-201ENST00000233573 PHKA1P46020 1223 aa19.02■□□□□ 0.64
ITGA4-201ENST00000233573 FOXD4L5Q5VV16 416 aaPredicted RBP19.02■□□□□ 0.64
ITGA4-201ENST00000233573 FOXD4L4Q8WXT5 416 aaPredicted RBP19.02■□□□□ 0.64
ITGA4-201ENST00000233573 MPHOSPH8Q99549 860 aa19.02■□□□□ 0.64
ITGA4-201ENST00000233573 TNRC6CQ9HCJ0 1690 aaKnown RBP19.02■□□□□ 0.64
ITGA4-201ENST00000233573 PLSCR1O15162 318 aa19.02■□□□□ 0.63
ITGA4-201ENST00000233573 APPBP2Q92624 585 aa19.02■□□□□ 0.63
ITGA4-201ENST00000233573 SMC3Q9UQE7 1217 aa19.02■□□□□ 0.63
ITGA4-201ENST00000233573 A0A1B0GUL6 1792 aa19.01■□□□□ 0.63
ITGA4-201ENST00000233573 SF3B3Q15393 1217 aaKnown RBP19.01■□□□□ 0.63
ITGA4-201ENST00000233573 SLC10A5Q5PT55 438 aa19.01■□□□□ 0.63
ITGA4-201ENST00000233573 TPTE2Q6XPS3 522 aa19.01■□□□□ 0.63
ITGA4-201ENST00000233573 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
ITGA4-201ENST00000233573 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
ITGA4-201ENST00000233573 SYT1P21579 422 aa19.01■□□□□ 0.63
ITGA4-201ENST00000233573 IGHMBP2P38935 993 aaKnown RBP19.01■□□□□ 0.63
ITGA4-201ENST00000233573 NECAB1Q8N987 351 aa19.01■□□□□ 0.63
ITGA4-201ENST00000233573 DOCK2Q92608 1830 aa19■□□□□ 0.63
ITGA4-201ENST00000233573 NPHP1O15259 732 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms