RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ANKIB1Q9P2G1 1089 aa14.11□□□□□ -0.15
SF3B6-201ENST00000233468 EIF6P56537 245 aaKnown RBP14.1□□□□□ -0.15
SF3B6-201ENST00000233468 RABL6Q3YEC7 729 aaPredicted RBP14.1□□□□□ -0.15
SF3B6-201ENST00000233468 LARGE2Q8N3Y3 721 aa14.1□□□□□ -0.15
SF3B6-201ENST00000233468 ZNF579Q8NAF0 562 aaKnown RBP14.1□□□□□ -0.15
SF3B6-201ENST00000233468 BICC1Q9H694 974 aaKnown RBP14.1□□□□□ -0.15
SF3B6-201ENST00000233468 GNAI2P04899 355 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 AOC3Q16853 763 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 DEFB115Q30KQ5 88 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 ITPRIPQ8IWB1 547 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 PODXL2Q9NZ53 605 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 XDHP47989 1333 aa14.09□□□□□ -0.15
SF3B6-201ENST00000233468 C6orf229H3BNL8 230 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 TRAF5O00463 557 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 PPIP5K2O43314 1243 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 ATP2B4P23634 1241 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 LBX1P52954 281 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 EPHA10Q5JZY3 1008 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 LDHAL6AQ6ZMR3 332 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 CNNM1Q9NRU3 951 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 WBP1LQ9NX94 342 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 MINPP1Q9UNW1 487 aa14.08□□□□□ -0.16
SF3B6-201ENST00000233468 RASSF10A6NK89 507 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 GPSM2P81274 684 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 PDE3AQ14432 1141 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 WASHC4Q2M389 1173 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 NIM1KQ8IY84 436 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 KAZALD1Q96I82 304 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 MEIS3Q99687 375 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 ZC3H12CQ9C0D7 883 aaKnown RBP14.07□□□□□ -0.16
SF3B6-201ENST00000233468 ABT1Q9ULW3 272 aaKnown RBP14.07□□□□□ -0.16
SF3B6-201ENST00000233468 LEMD3Q9Y2U8 911 aa14.07□□□□□ -0.16
SF3B6-201ENST00000233468 POLR2AP24928 1970 aaKnown RBP14.06□□□□□ -0.16
SF3B6-201ENST00000233468 G3V3G9 751 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 GABBR2O75899 941 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 UFL1O94874 794 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 LMOD1P29536 600 aaPredicted RBP14.06□□□□□ -0.16
SF3B6-201ENST00000233468 KCNJ4P48050 445 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
SF3B6-201ENST00000233468 CXCL9Q07325 125 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 KIAA2012Q0VF49 1180 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 CST9Q5W186 159 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 ANKRD44Q8N8A2 993 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 TBC1D16Q8TBP0 767 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 PRDM10Q9NQV6 1147 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
SF3B6-201ENST00000233468 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
SF3B6-201ENST00000233468 WDR33Q9C0J8 1336 aaKnown RBP14.06□□□□□ -0.16
SF3B6-201ENST00000233468 DDX60Q8IY21 1712 aaKnown RBP14.06□□□□□ -0.16
SF3B6-201ENST00000233468 COL4A1P02462 1669 aa14.05□□□□□ -0.16
SF3B6-201ENST00000233468 AIDAQ96BJ3 306 aa14.05□□□□□ -0.16
SF3B6-201ENST00000233468 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
SF3B6-201ENST00000233468 HSPA8P11142 646 aaKnown RBP14.04□□□□□ -0.16
SF3B6-201ENST00000233468 NUBP1P53384 320 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 CHRNDQ07001 517 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 GRM1Q13255 1194 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 POLLQ9UGP5 575 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 ZNRF3Q9ULT6 936 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 TNNQ9UQP3 1299 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 MROH5Q6ZUA9 1318 aa14.04□□□□□ -0.16
SF3B6-201ENST00000233468 SHTN1A0MZ66 631 aa14.03□□□□□ -0.16
SF3B6-201ENST00000233468 ZBTB7BO15156 539 aaPredicted RBP14.03□□□□□ -0.16
SF3B6-201ENST00000233468 RLBP1P12271 317 aa14.03□□□□□ -0.16
SF3B6-201ENST00000233468 MVPQ14764 893 aaKnown RBP14.03□□□□□ -0.16
SF3B6-201ENST00000233468 USP50Q70EL3 339 aaPredicted RBP14.03□□□□□ -0.16
SF3B6-201ENST00000233468 GPRC5DQ9NZD1 345 aa14.03□□□□□ -0.16
SF3B6-201ENST00000233468 DUOX1Q9NRD9 1551 aa14.02□□□□□ -0.16
SF3B6-201ENST00000233468 ZNF804BA4D1E1 1349 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 RIMBP2O15034 1052 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 SRGAP3O43295 1099 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 PLIN1O60240 522 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 RAD17O75943 681 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 GMPSP49915 693 aaPredicted RBP14.02□□□□□ -0.17
SF3B6-201ENST00000233468 MTX1Q13505 466 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 TNIP1Q15025 636 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.17
SF3B6-201ENST00000233468 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
SF3B6-201ENST00000233468 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 ZNF594Q96JF6 807 aaPredicted RBP14.02□□□□□ -0.17
SF3B6-201ENST00000233468 CAPNS2Q96L46 248 aa14.02□□□□□ -0.17
SF3B6-201ENST00000233468 THSD7BQ9C0I4 1608 aa14.01□□□□□ -0.17
SF3B6-201ENST00000233468 YDJCA8MPS7 323 aa14.01□□□□□ -0.17
SF3B6-201ENST00000233468 EYA2O00167 538 aa14.01□□□□□ -0.17
SF3B6-201ENST00000233468 AOC2O75106 756 aa14.01□□□□□ -0.17
SF3B6-201ENST00000233468 HIRAP54198 1017 aaPredicted RBP14.01□□□□□ -0.17
SF3B6-201ENST00000233468 METTL24Q5JXM2 366 aa14.01□□□□□ -0.17
SF3B6-201ENST00000233468 DLK2Q6UY11 383 aa14.01□□□□□ -0.17
SF3B6-201ENST00000233468 GLIS2Q9BZE0 524 aaPredicted RBP14.01□□□□□ -0.17
SF3B6-201ENST00000233468 ADARB2Q9NS39 739 aaKnown RBP14.01□□□□□ -0.17
SF3B6-201ENST00000233468 LRRC37AA6NMS7 1700 aa14.01□□□□□ -0.17
SF3B6-201ENST00000233468 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 MED23Q9ULK4 1368 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 CIAO1O76071 339 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 RRP1P56182 461 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms