RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 HDAC9Q9UKV0 1011 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 NEFHP12036 1026 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 MRE11P49959 708 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 TSNAXIP1Q2TAA8 658 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 TEKT1Q969V4 418 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 PIK3R4Q99570 1358 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 CDK12Q9NYV4 1490 aaPredicted RBP9.7□□□□□ -0.86
SPARC-201ENST00000231061 TRAF1Q13077 416 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 SLC4A10Q6U841 1118 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 TRIM42Q8IWZ5 723 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
SPARC-201ENST00000231061 EIF4A2Q14240 407 aaKnown RBP9.69□□□□□ -0.86
SPARC-201ENST00000231061 ENOX2Q16206 610 aaKnown RBP9.69□□□□□ -0.86
SPARC-201ENST00000231061 PDCL2Q8N4E4 241 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 SLC43A3Q8NBI5 491 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 TATDN2Q93075 761 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 MPP4Q96JB8 637 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 UNC45AQ9H3U1 944 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 GRPEL1Q9HAV7 217 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 CWC15Q9P013 229 aaKnown RBP9.69□□□□□ -0.86
SPARC-201ENST00000231061 FAM177BA6PVY3 158 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 TRIM66O15016 1216 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 HNRNPH2P55795 449 aaKnown RBP9.69□□□□□ -0.86
SPARC-201ENST00000231061 MCM6Q14566 821 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 PLEKHM2Q8IWE5 1019 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
SPARC-201ENST00000231061 FAM81BQ96LP2 452 aa9.69□□□□□ -0.86
SPARC-201ENST00000231061 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 ATP2B1P20020 1258 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 RAB3GAP1Q15042 981 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 SASS6Q6UVJ0 657 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 OTUD7AQ8TE49 926 aaPredicted RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 POM121Q96HA1 1249 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 MTRQ99707 1265 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 ALDH8A1Q9H2A2 487 aaPredicted RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 MIS18AQ9NYP9 233 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 SETD1BQ9UPS6 1966 aaKnown RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 CPSF1Q10570 1443 aaKnown RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 LDHCP07864 332 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 ADCY2Q08462 1091 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 AMOTL2Q9Y2J4 779 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 CPS1P31327 1500 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 SLC27A2O14975 620 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 CDKL5O76039 1030 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 TPP2P29144 1249 aaPredicted RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 STIP1P31948 543 aaKnown RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
SPARC-201ENST00000231061 TBC1D25Q3MII6 688 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 USP33Q8TEY7 942 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 DHRS1Q96LJ7 313 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 TMCC3Q9ULS5 477 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 DLC1Q96QB1 1528 aa9.68□□□□□ -0.86
SPARC-201ENST00000231061 KRT38O76015 456 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 MMEP08473 750 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 VCAM1P19320 739 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 TTC22Q5TAA0 569 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 SOGA3Q5TF21 947 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 HPS3Q969F9 1004 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 DCTPP1Q9H773 170 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 NCOA3Q9Y6Q9 1424 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 PYGLP06737 847 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 IRX1P78414 480 aaPredicted RBP9.67□□□□□ -0.86
SPARC-201ENST00000231061 FAAH2Q6GMR7 532 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 UBE2Q1Q7Z7E8 422 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 MEIS3Q99687 375 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 CRACR2AQ9BSW2 395 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 TPPPO94811 219 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 SASH1O94885 1247 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 DDIT3P35638 169 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 GSCP56915 257 aaPredicted RBP9.67□□□□□ -0.86
SPARC-201ENST00000231061 AGAP9Q5VTM2 703 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 INTS3Q68E01 1043 aaKnown RBP9.67□□□□□ -0.86
SPARC-201ENST00000231061 SUGP1Q8IWZ8 645 aaKnown RBP9.67□□□□□ -0.86
SPARC-201ENST00000231061 ANKRD44Q8N8A2 993 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 CERKQ8TCT0 537 aa9.67□□□□□ -0.86
SPARC-201ENST00000231061 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
SPARC-201ENST00000231061 PRR36Q9H6K5 1346 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
SPARC-201ENST00000231061 SLC4A2P04920 1241 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 TCF3P15923 654 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 NCAPG2Q86XI2 1143 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 MSH6P52701 1360 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 TTC21BQ7Z4L5 1316 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 RABEP1Q15276 862 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 SKOR2Q2VWA4 1001 aaPredicted RBP9.66□□□□□ -0.86
SPARC-201ENST00000231061 CEP85Q6P2H3 762 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 FLCNQ8NFG4 579 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 CCDC26Q8TAB7 109 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 SWAP70Q9UH65 585 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 FOSL1P15407 271 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 SESN3P58005 492 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 PREPLQ4J6C6 727 aaPredicted RBP9.66□□□□□ -0.86
SPARC-201ENST00000231061 DZIP1Q86YF9 867 aaKnown RBP9.66□□□□□ -0.86
SPARC-201ENST00000231061 KIAA0825Q8IV33 1275 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 ATRIPQ8WXE1 791 aa9.66□□□□□ -0.86
SPARC-201ENST00000231061 ACEP12821 1306 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms