RNA–Protein interactions for RNA: ENST00000229304.4

APOBEC1-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-201ENST00000229304 LSG1Q9H089 658 aaKnown RBP11.54□□□□□ -0.56
APOBEC1-201ENST00000229304 ANO2Q9NQ90 1003 aa11.54□□□□□ -0.56
APOBEC1-201ENST00000229304 RTCBQ9Y3I0 505 aaKnown RBP11.54□□□□□ -0.56
APOBEC1-201ENST00000229304 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
APOBEC1-201ENST00000229304 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 HSPA4P34932 840 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 RBM6P78332 1123 aaKnown RBP11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 CCDC152Q4G0S7 254 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 FAM182BQ5T319 152 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 LDHAL6AQ6ZMR3 332 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 KIAA1211Q6ZU35 1233 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 VGLL2Q8N8G2 317 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 ZNF512BQ96KM6 892 aaPredicted RBP11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 IL25Q9H293 177 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 MROH5Q6ZUA9 1318 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 TUBGCP6Q96RT7 1819 aa11.53□□□□□ -0.56
APOBEC1-201ENST00000229304 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.56
APOBEC1-201ENST00000229304 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 GNPATO15228 680 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 TIMM10P62072 90 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 CCDC158Q5M9N0 1113 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 KCNB2Q92953 911 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 NEUROD6Q96NK8 337 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 FSD1Q9BTV5 496 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 NYXQ9GZU5 481 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.57
APOBEC1-201ENST00000229304 ZPR1O75312 459 aa11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 HCLS1P14317 486 aaPredicted RBP11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 MCM2P49736 904 aa11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 ARSIQ5FYB1 569 aa11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 METTL24Q5JXM2 366 aa11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 XAGE2Q96GT9 111 aa11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 CCDC85AQ96PX6 553 aaPredicted RBP11.51□□□□□ -0.57
APOBEC1-201ENST00000229304 MYH14Q7Z406 1995 aaKnown RBP11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 LRP5O75197 1615 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 ANKRD36CQ5JPF3 1778 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 PDE8BO95263 885 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 FGFR2P21802 821 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 KCNQ4P56696 695 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 TRAPPC3LQ5T215 181 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 ILDR2Q71H61 639 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 MED23Q9ULK4 1368 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 KAT6BQ8WYB5 2073 aa11.5□□□□□ -0.57
APOBEC1-201ENST00000229304 BTAF1O14981 1849 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 IFIT1P09914 478 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 DDIT3P35638 169 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 IGHMBP2P38935 993 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 PUM3Q15397 648 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 TBC1D9BQ66K14 1250 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 LPIN2Q92539 896 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 MAP4K1Q92918 833 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 SETDB2Q96T68 719 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 CDC5LQ99459 802 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 LRRC4BQ9NT99 713 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 PAG1Q9NWQ8 432 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 CCDC171Q6TFL3 1326 aa11.49□□□□□ -0.57
APOBEC1-201ENST00000229304 A0A0D9SFI3 127 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 ADORA1P30542 326 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 TTC39AQ5SRH9 613 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 GORABQ5T7V8 394 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 TPTE2Q6XPS3 522 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 FAM227BQ96M60 508 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 MPHOSPH8Q99549 860 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 TM6SF1Q9BZW5 370 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 HELLSQ9NRZ9 838 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 CHMP5Q9NZZ3 219 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 NUP98P52948 1817 aa11.48□□□□□ -0.57
APOBEC1-201ENST00000229304 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 ZFYP08048 801 aaPredicted RBP11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 UQCRFS1P1P0C7P4 283 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 SSFA2P28290 1259 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 RFC4P35249 363 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 MCMDC2Q4G0Z9 681 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 DDX46Q7L014 1031 aaKnown RBP11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 AMIGO3Q86WK7 504 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 EDC3Q96F86 508 aaKnown RBP11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 SNX14Q9Y5W7 946 aa11.47□□□□□ -0.57
APOBEC1-201ENST00000229304 BCORQ6W2J9 1755 aa11.46□□□□□ -0.57
APOBEC1-201ENST00000229304 LY75O60449 1722 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms