RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 STAMQ92783 540 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 VAT1LQ9HCJ6 419 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 ATP7AQ04656 1500 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 A0A1B0GUL7 405 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 ANKRD18BA2A2Z9 1011 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 ARID5BQ14865 1188 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 hCG_1642624A0A1W2PR95 340 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 B4E1Z4 1266 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 A1BGP04217 495 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 FKBP15Q5T1M5 1219 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 ZNF589Q86UQ0 364 aaPredicted RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 CACTINQ8WUQ7 758 aaKnown RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 ZNF496Q96IT1 587 aaPredicted RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 PLIN2Q99541 437 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 OGFRQ9NZT2 677 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 TERF1P54274 439 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 SLFNL1Q499Z3 407 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 TIGD1Q96MW7 591 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 XPO4Q9C0E2 1151 aaKnown RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 KDM5AP29375 1690 aaKnown RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
NFKB1-201ENST00000226574 ZMYM3Q14202 1370 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 TNRQ92752 1358 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
NFKB1-201ENST00000226574 IDEP14735 1019 aa15.78■□□□□ 0.12
NFKB1-201ENST00000226574 IL15P40933 162 aaPredicted RBP15.78■□□□□ 0.12
NFKB1-201ENST00000226574 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
NFKB1-201ENST00000226574 RNF113AO15541 343 aaKnown RBP15.78■□□□□ 0.12
NFKB1-201ENST00000226574 BEND3Q5T5X7 828 aa15.78■□□□□ 0.12
NFKB1-201ENST00000226574 TRMT44Q8IYL2 757 aaKnown RBP15.78■□□□□ 0.12
NFKB1-201ENST00000226574 CTCFLQ8NI51 663 aaPredicted RBP15.78■□□□□ 0.12
NFKB1-201ENST00000226574 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
NFKB1-201ENST00000226574 CEP131Q9UPN4 1083 aa15.78■□□□□ 0.12
NFKB1-201ENST00000226574 CCDC196A0A1B0GTZ2 297 aa15.78■□□□□ 0.12
NFKB1-201ENST00000226574 EVCP57679 992 aa15.78■□□□□ 0.12
NFKB1-201ENST00000226574 NUTM2BA6NNL0 878 aaPredicted RBP15.77■□□□□ 0.12
NFKB1-201ENST00000226574 NUTM2EB1AL46 878 aaPredicted RBP15.77■□□□□ 0.12
NFKB1-201ENST00000226574 ZNF202O95125 648 aa15.77■□□□□ 0.12
NFKB1-201ENST00000226574 NUTM2AQ8IVF1 878 aaPredicted RBP15.77■□□□□ 0.12
NFKB1-201ENST00000226574 MRVI1Q9Y6F6 885 aa15.77■□□□□ 0.12
NFKB1-201ENST00000226574 GOLGA8FQ08AF8 430 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 GOLGA8DPQ0D2H9 430 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 IQCA1Q86XH1 822 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.11
NFKB1-201ENST00000226574 GTPBP4Q9BZE4 634 aaKnown RBP15.77■□□□□ 0.11
NFKB1-201ENST00000226574 FAM107BQ9H098 131 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 JADE2Q9NQC1 790 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 JAG2Q9Y219 1238 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 VGLL3A8MV65 326 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 ODF2Q5BJF6 829 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 IP6K1Q92551 441 aa15.77■□□□□ 0.11
NFKB1-201ENST00000226574 SRRTQ9BXP5 876 aaKnown RBP15.77■□□□□ 0.11
NFKB1-201ENST00000226574 LTKP29376 864 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 FANCCQ00597 558 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 WTAPQ15007 396 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 LONRF3Q496Y0 759 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 ZFYVE27Q5T4F4 411 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 KIAA1524Q8TCG1 905 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 CCT6AP40227 531 aaKnown RBP15.76■□□□□ 0.11
NFKB1-201ENST00000226574 GCKRQ14397 625 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 CMTR1Q8N1G2 835 aaKnown RBP15.76■□□□□ 0.11
NFKB1-201ENST00000226574 CCDC148Q8NFR7 591 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 CAPZA3Q96KX2 299 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 RABEP2Q9H5N1 569 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 KIAA0232Q92628 1395 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 FEZ1Q99689 392 aa15.76■□□□□ 0.11
NFKB1-201ENST00000226574 ZNF569Q5MCW4 686 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 SOGA3Q5TF21 947 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 TRMT1LQ7Z2T5 733 aaKnown RBP15.75■□□□□ 0.11
NFKB1-201ENST00000226574 STAP2Q9UGK3 403 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 ERCC3P19447 782 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 TDRD12Q587J7 1177 aaKnown RBP15.75■□□□□ 0.11
NFKB1-201ENST00000226574 DNAJC21Q5F1R6 531 aaKnown RBP15.75■□□□□ 0.11
NFKB1-201ENST00000226574 MKNK2Q9HBH9 465 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 RSPH14Q9UHP6 348 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 ADD1P35611 737 aaKnown RBP15.75■□□□□ 0.11
NFKB1-201ENST00000226574 GUCA1BQ9UMX6 200 aa15.75■□□□□ 0.11
NFKB1-201ENST00000226574 MYL5Q02045 173 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 RTN1Q16799 776 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 C10orf67Q8IYJ2 551 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 METP08581 1390 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 RGS12O14924 1447 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 GIGYF1O75420 1035 aaPredicted RBP15.74■□□□□ 0.11
NFKB1-201ENST00000226574 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
NFKB1-201ENST00000226574 CT47A1Q5JQC4 288 aaPredicted RBP15.74■□□□□ 0.11
NFKB1-201ENST00000226574 ANO1Q5XXA6 986 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 KBTBD3Q8NAB2 608 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 SMARCC1Q92922 1105 aaPredicted RBP15.74■□□□□ 0.11
NFKB1-201ENST00000226574 ERO1AQ96HE7 468 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 GJB4Q9NTQ9 266 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 PRDM1O75626 825 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 UBA7P41226 1012 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms