RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CCDC8Q9H0W5 538 aaPredicted RBP29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 BCL2L12Q9HB09 334 aa29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 SRP68Q9UHB9 627 aaKnown RBP29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 TRMT112Q9UI30 125 aaKnown RBP29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 NIP7Q9Y221 180 aaKnown RBP eCLIP29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 C4AP0C0L4 1744 aa29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 ZPR1O75312 459 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 LARGE1O95461 756 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 BLOC1S2Q6QNY1 142 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 ME3Q16798 604 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 SUSD4Q5VX71 490 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 LMBR1LQ6UX01 489 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 FAM227BQ96M60 508 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 PLA2G12BQ9BX93 195 aa29.57■■■□□ 2.32
RUNDC3A-201ENST00000225441 ELP1O95163 1332 aa29.55■■■□□ 2.32
RUNDC3A-201ENST00000225441 RRP9O43818 475 aaKnown RBP29.55■■■□□ 2.32
RUNDC3A-201ENST00000225441 RPS6KB1P23443 525 aa29.55■■■□□ 2.32
RUNDC3A-201ENST00000225441 CPA1P15085 419 aa29.55■■■□□ 2.32
RUNDC3A-201ENST00000225441 RFC4P35249 363 aa29.55■■■□□ 2.32
RUNDC3A-201ENST00000225441 RFX5P48382 616 aaPredicted RBP29.55■■■□□ 2.32
RUNDC3A-201ENST00000225441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.54■■■□□ 2.32
RUNDC3A-201ENST00000225441 SYNE4Q8N205 404 aa29.54■■■□□ 2.32
RUNDC3A-201ENST00000225441 RNF214Q8ND24 703 aa29.54■■■□□ 2.32
RUNDC3A-201ENST00000225441 UTP14AQ9BVJ6 771 aaKnown RBP29.54■■■□□ 2.32
RUNDC3A-201ENST00000225441 BOLA2Q9H3K6 86 aa29.54■■■□□ 2.32
RUNDC3A-201ENST00000225441 TPCN1Q9ULQ1 816 aa29.53■■■□□ 2.32
RUNDC3A-201ENST00000225441 A0A0D9SFI3 127 aa29.52■■■□□ 2.32
RUNDC3A-201ENST00000225441 IRS4O14654 1257 aaPredicted RBP29.52■■■□□ 2.32
RUNDC3A-201ENST00000225441 NTSR2O95665 410 aa29.52■■■□□ 2.32
RUNDC3A-201ENST00000225441 ST3GAL1Q11201 340 aa29.52■■■□□ 2.32
RUNDC3A-201ENST00000225441 FOXD4L6Q3SYB3 417 aaPredicted RBP29.52■■■□□ 2.32
RUNDC3A-201ENST00000225441 FOXD4L3Q6VB84 417 aaPredicted RBP29.52■■■□□ 2.32
RUNDC3A-201ENST00000225441 SH3TC1Q8TE82 1336 aa29.51■■■□□ 2.32
RUNDC3A-201ENST00000225441 KRT85P78386 507 aa29.51■■■□□ 2.31
RUNDC3A-201ENST00000225441 TNNI3KQ59H18 835 aa29.51■■■□□ 2.31
RUNDC3A-201ENST00000225441 LARP1BQ659C4 914 aaKnown RBP29.51■■■□□ 2.31
RUNDC3A-201ENST00000225441 TBC1D9BQ66K14 1250 aa29.51■■■□□ 2.31
RUNDC3A-201ENST00000225441 TLR7Q9NYK1 1049 aaKnown RBP29.51■■■□□ 2.31
RUNDC3A-201ENST00000225441 FPGT-TNNI3KV9GXZ4 949 aa29.51■■■□□ 2.31
RUNDC3A-201ENST00000225441 FAM177BA6PVY3 158 aa29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 TAF5LO75529 589 aa29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 CHMP3Q9Y3E7 222 aa29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 U3KPZ7 1027 aaPredicted RBP29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 FIBPO43427 364 aa29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 PTPN12Q05209 780 aaKnown RBP29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 SIL1Q9H173 461 aa29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.5■■■□□ 2.31
RUNDC3A-201ENST00000225441 ZNF827Q17R98 1081 aa29.49■■■□□ 2.31
RUNDC3A-201ENST00000225441 AKT1S1Q96B36 256 aa29.49■■■□□ 2.31
RUNDC3A-201ENST00000225441 LARP6Q9BRS8 491 aaKnown RBP29.49■■■□□ 2.31
RUNDC3A-201ENST00000225441 FUCA2Q9BTY2 467 aa29.49■■■□□ 2.31
RUNDC3A-201ENST00000225441 PTMAP06454 111 aaKnown RBP29.48■■■□□ 2.31
RUNDC3A-201ENST00000225441 CSF1RP07333 972 aa29.48■■■□□ 2.31
RUNDC3A-201ENST00000225441 DNM1Q05193 864 aaKnown RBP29.48■■■□□ 2.31
RUNDC3A-201ENST00000225441 KLHDC4Q8TBB5 520 aa29.48■■■□□ 2.31
RUNDC3A-201ENST00000225441 BICDL1Q6ZP65 573 aa29.48■■■□□ 2.31
RUNDC3A-201ENST00000225441 SCAND2PQ9GZW5 306 aaPredicted RBP29.48■■■□□ 2.31
RUNDC3A-201ENST00000225441 GPR108Q9NPR9 543 aa29.48■■■□□ 2.31
RUNDC3A-201ENST00000225441 PDE8AO60658 829 aa29.47■■■□□ 2.31
RUNDC3A-201ENST00000225441 HAUS7Q99871 368 aa29.47■■■□□ 2.31
RUNDC3A-201ENST00000225441 COL24A1Q17RW2 1714 aa29.46■■■□□ 2.31
RUNDC3A-201ENST00000225441 CTSWP56202 376 aa29.46■■■□□ 2.31
RUNDC3A-201ENST00000225441 CAMKK2Q96RR4 588 aa29.46■■■□□ 2.31
RUNDC3A-201ENST00000225441 SETDB2Q96T68 719 aa29.46■■■□□ 2.31
RUNDC3A-201ENST00000225441 VPS37CA5D8V6 355 aaPredicted RBP29.45■■■□□ 2.31
RUNDC3A-201ENST00000225441 DBNLQ9UJU6 430 aaKnown RBP29.45■■■□□ 2.31
RUNDC3A-201ENST00000225441 EN1Q05925 392 aaPredicted RBP29.45■■■□□ 2.3
RUNDC3A-201ENST00000225441 TFCP2L1Q9NZI6 479 aa29.45■■■□□ 2.3
RUNDC3A-201ENST00000225441 TPM3P06753 285 aa29.44■■■□□ 2.3
RUNDC3A-201ENST00000225441 TOB2Q14106 344 aaPredicted RBP29.44■■■□□ 2.3
RUNDC3A-201ENST00000225441 NECAB1Q8N987 351 aa29.44■■■□□ 2.3
RUNDC3A-201ENST00000225441 TTLL11Q8NHH1 800 aa29.44■■■□□ 2.3
RUNDC3A-201ENST00000225441 LAMB2P55268 1798 aa29.44■■■□□ 2.3
RUNDC3A-201ENST00000225441 MYH3P11055 1940 aa29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 HMGB1P09429 215 aaKnown RBP29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 HSP90B1P14625 803 aaKnown RBP29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 KIAA2012Q0VF49 1180 aa29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 EZH2Q15910 746 aaKnown RBP29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 DDX60Q8IY21 1712 aaKnown RBP29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 KDM4AO75164 1064 aa29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 HCLS1P14317 486 aaPredicted RBP29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 TFCP2Q12800 502 aa29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 SF3B2Q13435 895 aaKnown RBP29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 MCMDC2Q4G0Z9 681 aa29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 ILDR2Q71H61 639 aa29.43■■■□□ 2.3
RUNDC3A-201ENST00000225441 CCDC57Q2TAC2 916 aa29.42■■■□□ 2.3
RUNDC3A-201ENST00000225441 CHMP4CQ96CF2 233 aa29.42■■■□□ 2.3
RUNDC3A-201ENST00000225441 NEK1Q96PY6 1258 aa29.42■■■□□ 2.3
RUNDC3A-201ENST00000225441 CCDC192P0DO97 292 aa29.41■■■□□ 2.3
RUNDC3A-201ENST00000225441 GYS1P13807 737 aa29.41■■■□□ 2.3
RUNDC3A-201ENST00000225441 ZNF589Q86UQ0 364 aaPredicted RBP29.41■■■□□ 2.3
RUNDC3A-201ENST00000225441 CCDC85AQ96PX6 553 aaPredicted RBP29.41■■■□□ 2.3
RUNDC3A-201ENST00000225441 NYXQ9GZU5 481 aa29.41■■■□□ 2.3
RUNDC3A-201ENST00000225441 HSP90AA2PQ14568 343 aaPredicted RBP29.41■■■□□ 2.3
RUNDC3A-201ENST00000225441 ERFEQ4G0M1 354 aa29.4■■■□□ 2.3
RUNDC3A-201ENST00000225441 LLPHQ9BRT6 129 aaKnown RBP29.4■■■□□ 2.3
RUNDC3A-201ENST00000225441 BAG6P46379 1132 aa29.39■■■□□ 2.3
RUNDC3A-201ENST00000225441 IFIT5Q13325 482 aaKnown RBP29.39■■■□□ 2.3
RUNDC3A-201ENST00000225441 NBPF5PQ86XG9 351 aaPredicted RBP29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms