RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 EPHX2P34913 555 aa15.84■□□□□ 0.13
LSM5-201ENST00000223084 EAPPQ56P03 285 aaPredicted RBP15.84■□□□□ 0.13
LSM5-201ENST00000223084 METTL24Q5JXM2 366 aa15.84■□□□□ 0.13
LSM5-201ENST00000223084 SIL1Q9H173 461 aa15.84■□□□□ 0.13
LSM5-201ENST00000223084 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
LSM5-201ENST00000223084 PA2G4Q9UQ80 394 aaKnown RBP15.84■□□□□ 0.13
LSM5-201ENST00000223084 IRS2Q9Y4H2 1338 aa15.84■□□□□ 0.13
LSM5-201ENST00000223084 EYA2O00167 538 aa15.83■□□□□ 0.12
LSM5-201ENST00000223084 COA1Q9GZY4 146 aa15.83■□□□□ 0.12
LSM5-201ENST00000223084 GPRC5DQ9NZD1 345 aa15.83■□□□□ 0.12
LSM5-201ENST00000223084 MROH5Q6ZUA9 1318 aa15.83■□□□□ 0.12
LSM5-201ENST00000223084 ZBTB7BO15156 539 aaPredicted RBP15.82■□□□□ 0.12
LSM5-201ENST00000223084 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
LSM5-201ENST00000223084 ATG9AQ7Z3C6 839 aa15.82■□□□□ 0.12
LSM5-201ENST00000223084 PODNQ7Z5L7 613 aa15.82■□□□□ 0.12
LSM5-201ENST00000223084 PNMA6EA0A0J9YXQ4 647 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 VIL1P09327 827 aaKnown RBP15.81■□□□□ 0.12
LSM5-201ENST00000223084 UBE4AQ14139 1066 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 C15orf52Q6ZUT6 534 aaKnown RBP15.81■□□□□ 0.12
LSM5-201ENST00000223084 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 FBXW7Q969H0 707 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 MXD3Q9BW11 206 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 CD209Q9NNX6 404 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 CNOT7Q9UIV1 285 aaKnown RBP15.81■□□□□ 0.12
LSM5-201ENST00000223084 COG6Q9Y2V7 657 aa15.81■□□□□ 0.12
LSM5-201ENST00000223084 USP17L3A6NCW0 530 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 USP17L4A6NCW7 530 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 PDE8BO95263 885 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 MS4A1P11836 297 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 MTX1Q13505 466 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 C20orf194Q5TEA3 1177 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 USP17L1Q7RTZ2 530 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 PSME4Q14997 1843 aa15.8■□□□□ 0.12
LSM5-201ENST00000223084 GYG1P46976 350 aa15.79■□□□□ 0.12
LSM5-201ENST00000223084 FSTL1Q12841 308 aa15.79■□□□□ 0.12
LSM5-201ENST00000223084 MVPQ14764 893 aaKnown RBP15.79■□□□□ 0.12
LSM5-201ENST00000223084 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
LSM5-201ENST00000223084 RSBN1LQ6PCB5 846 aaPredicted RBP15.79■□□□□ 0.12
LSM5-201ENST00000223084 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
LSM5-201ENST00000223084 LDHDQ86WU2 507 aa15.79■□□□□ 0.12
LSM5-201ENST00000223084 COPRSQ9NQ92 184 aa15.79■□□□□ 0.12
LSM5-201ENST00000223084 CIAO1O76071 339 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 HSPA6P17066 643 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 GTF2IP78347 998 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 DACT2Q5SW24 774 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 TTLL5Q6EMB2 1281 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 ZNF804AQ7Z570 1209 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 TRPM4Q8TD43 1214 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 DPF2Q92785 391 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 ADARB2Q9NS39 739 aaKnown RBP15.78■□□□□ 0.12
LSM5-201ENST00000223084 JAG2Q9Y219 1238 aa15.78■□□□□ 0.12
LSM5-201ENST00000223084 H7C1D1 291 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 CAPN15O75808 1086 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 EGFRP00533 1210 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 FGFR2P21802 821 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 RPS12P25398 132 aaKnown RBP15.77■□□□□ 0.12
LSM5-201ENST00000223084 HIRAP54198 1017 aaPredicted RBP15.77■□□□□ 0.12
LSM5-201ENST00000223084 ATP8B2P98198 1209 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
LSM5-201ENST00000223084 RBM26Q5T8P6 1007 aaKnown RBP15.77■□□□□ 0.12
LSM5-201ENST00000223084 MAP1SQ66K74 1059 aaPredicted RBP15.77■□□□□ 0.12
LSM5-201ENST00000223084 SAMD7Q7Z3H4 446 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.77■□□□□ 0.12
LSM5-201ENST00000223084 FAM84BQ96KN1 310 aaPredicted RBP15.77■□□□□ 0.12
LSM5-201ENST00000223084 GMLQ99445 158 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 CEP126Q9P2H0 1117 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 FBXO3Q9UK99 471 aa15.77■□□□□ 0.12
LSM5-201ENST00000223084 ZNF646O15015 1829 aaPredicted RBP15.76■□□□□ 0.11
LSM5-201ENST00000223084 IL1R1P14778 569 aa15.76■□□□□ 0.11
LSM5-201ENST00000223084 HIBADHP31937 336 aaKnown RBP15.76■□□□□ 0.11
LSM5-201ENST00000223084 IL15P40933 162 aaPredicted RBP15.76■□□□□ 0.11
LSM5-201ENST00000223084 POLA2Q14181 598 aa15.76■□□□□ 0.11
LSM5-201ENST00000223084 TBC1D10BQ4KMP7 808 aaPredicted RBP15.76■□□□□ 0.11
LSM5-201ENST00000223084 STRIP1Q5VSL9 837 aa15.76■□□□□ 0.11
LSM5-201ENST00000223084 USP50Q70EL3 339 aaPredicted RBP15.76■□□□□ 0.11
LSM5-201ENST00000223084 AGBL3Q8NEM8 1001 aa15.76■□□□□ 0.11
LSM5-201ENST00000223084 ADAMTSL1Q8N6G6 1762 aa15.76■□□□□ 0.11
LSM5-201ENST00000223084 IFIT1P09914 478 aaKnown RBP15.75■□□□□ 0.11
LSM5-201ENST00000223084 BCAMP50895 628 aa15.75■□□□□ 0.11
LSM5-201ENST00000223084 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
LSM5-201ENST00000223084 FBXO33Q7Z6M2 555 aa15.75■□□□□ 0.11
LSM5-201ENST00000223084 IQSEC3Q9UPP2 1182 aaPredicted RBP15.75■□□□□ 0.11
LSM5-201ENST00000223084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.75■□□□□ 0.11
LSM5-201ENST00000223084 SLC5A1P13866 664 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 TFCP2Q12800 502 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 PDE3AQ14432 1141 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 ATP2B3Q16720 1220 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 CEP85Q6P2H3 762 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 VPS37DQ86XT2 251 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 CERS5Q8N5B7 392 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 TDRD7Q8NHU6 1098 aaKnown RBP15.74■□□□□ 0.11
LSM5-201ENST00000223084 SSH3Q8TE77 659 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
LSM5-201ENST00000223084 USP17L8P0C7I0 530 aa15.73■□□□□ 0.11
LSM5-201ENST00000223084 HTRA3P83110 453 aa15.73■□□□□ 0.11
LSM5-201ENST00000223084 G3BP1Q13283 466 aaKnown RBP eCLIP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms