RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 MROH5Q6ZUA9 1318 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 IGKV5-2P06315 115 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 MFSD6Q6ZSS7 791 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 RNF113AO15541 343 aaKnown RBP11.02□□□□□ -0.65
CCDC113-201ENST00000219299 MBD3O95983 291 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 HLA-DOAP06340 250 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 SYNE4Q8N205 404 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 STX8Q9UNK0 236 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 RBM8AQ9Y5S9 174 aaKnown RBP11.02□□□□□ -0.65
CCDC113-201ENST00000219299 CEBPZQ03701 1054 aaKnown RBP11.01□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC47Q96A33 483 aaKnown RBP11.01□□□□□ -0.65
CCDC113-201ENST00000219299 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
CCDC113-201ENST00000219299 NARFQ9UHQ1 456 aa11.01□□□□□ -0.65
CCDC113-201ENST00000219299 PDE4BQ07343 736 aa11.01□□□□□ -0.65
CCDC113-201ENST00000219299 CLEC4GQ6UXB4 293 aa11.01□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC83Q8IWF9 413 aa11.01□□□□□ -0.65
CCDC113-201ENST00000219299 MNS1Q8NEH6 495 aa11.01□□□□□ -0.65
CCDC113-201ENST00000219299 ZSCAN31Q96LW9 406 aaPredicted RBP11.01□□□□□ -0.65
CCDC113-201ENST00000219299 MAGEB6P1A0A0J9YX57 407 aa11.01□□□□□ -0.65
CCDC113-201ENST00000219299 GYG1P46976 350 aa11.01□□□□□ -0.65
CCDC113-201ENST00000219299 NEK1Q96PY6 1258 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 COPRSQ9NQ92 184 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 PPFIA3O75145 1194 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
CCDC113-201ENST00000219299 HMGB1P09429 215 aaKnown RBP11□□□□□ -0.65
CCDC113-201ENST00000219299 RBM10P98175 930 aaKnown RBP11□□□□□ -0.65
CCDC113-201ENST00000219299 SASS6Q6UVJ0 657 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 LRRC2Q9BYS8 371 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 ZBTB7AO95365 584 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 TPD52L1Q16890 204 aaPredicted RBP11□□□□□ -0.65
CCDC113-201ENST00000219299 RAB11FIP4Q86YS3 637 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 CNKSR1Q969H4 720 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 MCM9Q9NXL9 1143 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 PPIP5K2O43314 1243 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 CHMLP26374 656 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 ZAP70P43403 619 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
CCDC113-201ENST00000219299 CHRNDQ07001 517 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 SOGA3Q5TF21 947 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
CCDC113-201ENST00000219299 CDKL5O76039 1030 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 FEZ1Q99689 392 aa11□□□□□ -0.65
CCDC113-201ENST00000219299 FIBPO43427 364 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 SLC12A7Q9Y666 1083 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 PDE8BO95263 885 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 NCOA7Q8NI08 942 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 GRPEL1Q9HAV7 217 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 HOOK1Q9UJC3 728 aaKnown RBP10.99□□□□□ -0.65
CCDC113-201ENST00000219299 COL15A1P39059 1388 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 ESPNB1AK53 854 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 MBD4O95243 580 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 BCAMP50895 628 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC96Q2M329 555 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 GTF2IP78347 998 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
CCDC113-201ENST00000219299 HSP90B2PQ58FF3 399 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 FERMT3Q86UX7 667 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC144CPQ8IYA2 1237 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 WDR66Q8TBY9 1149 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 CABP5Q9NP86 173 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
CCDC113-201ENST00000219299 GPR162Q16538 588 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 CAVIN1Q6NZI2 390 aaKnown RBP10.98□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC129Q6ZRS4 1044 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 TTLL11Q8NHH1 800 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 GOLGA8BA8MQT2 603 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 EPHA10Q5JZY3 1008 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 SPATA5Q8NB90 893 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 LIMCH1Q9UPQ0 1083 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 H7C1W4 665 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 ITPK1Q13572 414 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 DOK7Q18PE1 504 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC73Q6ZRK6 1079 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
CCDC113-201ENST00000219299 KBTBD3Q8NAB2 608 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 BRF1Q92994 677 aa10.98□□□□□ -0.65
CCDC113-201ENST00000219299 ADRA2BP18089 450 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 FAM227BQ96M60 508 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC196A0A1B0GTZ2 297 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 PLCG2P16885 1265 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 ITSN1Q15811 1721 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 DEFB132Q7Z7B7 95 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 CCDC43Q96MW1 224 aaKnown RBP10.97□□□□□ -0.65
CCDC113-201ENST00000219299 TSPY26PQ9H489 355 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 RNF214Q8ND24 703 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 MEGF6O75095 1541 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 KDM2BQ8NHM5 1336 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 IPO7O95373 1038 aaKnown RBP10.97□□□□□ -0.65
CCDC113-201ENST00000219299 MCM5P33992 734 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 EIF5P55010 431 aaKnown RBP10.97□□□□□ -0.65
CCDC113-201ENST00000219299 CATIPQ7Z7H3 387 aa10.97□□□□□ -0.65
CCDC113-201ENST00000219299 STK38Q15208 465 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms