RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 GTF3C6Q969F1 213 aa17■□□□□ 0.31
NDFIP2-201ENST00000218652 RXRAP19793 462 aa16.99■□□□□ 0.31
NDFIP2-201ENST00000218652 C10orf67Q8IYJ2 551 aa16.99■□□□□ 0.31
NDFIP2-201ENST00000218652 SYNCQ9H7C4 482 aa16.99■□□□□ 0.31
NDFIP2-201ENST00000218652 KIF4AO95239 1232 aa16.99■□□□□ 0.31
NDFIP2-201ENST00000218652 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
NDFIP2-201ENST00000218652 ACEP12821 1306 aa16.99■□□□□ 0.31
NDFIP2-201ENST00000218652 CPLX4Q7Z7G2 160 aa16.99■□□□□ 0.31
NDFIP2-201ENST00000218652 CEBPAP49715 358 aaPredicted RBP16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 TTLL12Q14166 644 aaPredicted RBP16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 HS1BP3Q53T59 392 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 A0A1B0GVL5 298 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 VAV2P52735 878 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 CNNM2Q9H8M5 875 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 LUC7L2Q9Y383 392 aaKnown RBP16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 MRVI1Q9Y6F6 885 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 TERF1P54274 439 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 NAPAP54920 295 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 UBXN1Q04323 297 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 FAM173BQ6P4H8 233 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 TCHPQ9BT92 498 aa16.98■□□□□ 0.31
NDFIP2-201ENST00000218652 PLIN2Q99541 437 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 FERP16591 822 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 SELENOSQ9BQE4 189 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 TUBB4AP04350 444 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 NSRP1Q9H0G5 558 aaKnown RBP16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 CCDC121Q6ZUS5 278 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 FERMT1Q9BQL6 677 aa16.97■□□□□ 0.31
NDFIP2-201ENST00000218652 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 GNAQP50148 359 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 HELBQ8NG08 1087 aaPredicted RBP16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 TSNARE1Q96NA8 513 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 F8W031 263 aaPredicted RBP16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 PPM1FP49593 454 aaPredicted RBP16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 CCDC25Q86WR0 208 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 PAG1Q9NWQ8 432 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 DTNBO60941 627 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
NDFIP2-201ENST00000218652 CCDC160A6NGH7 325 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 ARL1P40616 181 aaPredicted RBP16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 RBSNQ9H1K0 784 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 VAMP4O75379 141 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 PPP2R3AQ06190 1150 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 ARFGAP2Q8N6H7 521 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 EEF2P13639 858 aaKnown RBP16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 EVCP57679 992 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 KRT79Q5XKE5 535 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 DHX32Q7L7V1 743 aaKnown RBP16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 ANKS4BQ8N8V4 417 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 INTS4Q96HW7 963 aaKnown RBP16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 CCDC114Q96M63 670 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 ZBTB40Q9NUA8 1239 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 CHMLP26374 656 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 RASAL2Q9UJF2 1139 aa16.95■□□□□ 0.3
NDFIP2-201ENST00000218652 ABCC5O15440 1437 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 GSTA5Q7RTV2 222 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 NBPF5PQ86XG9 351 aaPredicted RBP16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 TNNI2P48788 182 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 SPATA24Q86W54 205 aa16.94■□□□□ 0.3
NDFIP2-201ENST00000218652 CCDC122Q5T0U0 273 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 CFAP58Q5T655 872 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 ATP2A1O14983 1001 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 MCM7P33993 719 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 USP37Q86T82 979 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 NEK11Q8NG66 645 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 NSD2O96028 1365 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 MYL5Q02045 173 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 APBB1IPQ7Z5R6 666 aaPredicted RBP16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 EPRSP07814 1512 aaKnown RBP16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 C17orf53Q8N3J3 647 aaPredicted RBP16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 IQUBQ8NA54 791 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 SMC6Q96SB8 1091 aa16.93■□□□□ 0.3
NDFIP2-201ENST00000218652 GTPBP4Q9BZE4 634 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms