RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CAVIN4Q5BKX8 364 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 B4GALNT3Q6L9W6 998 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 C15orf52Q6ZUT6 534 aaKnown RBP16.19■□□□□ 0.18
TIMP1-201ENST00000218388 AACSQ86V21 672 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 NEUROD6Q96NK8 337 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 IL1RAPL2Q9NP60 686 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 G3V3G9 751 aa16.18■□□□□ 0.18
TIMP1-201ENST00000218388 NFKBIEO00221 500 aa16.18■□□□□ 0.18
TIMP1-201ENST00000218388 GORABQ5T7V8 394 aa16.18■□□□□ 0.18
TIMP1-201ENST00000218388 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
TIMP1-201ENST00000218388 PPIP5K2O43314 1243 aa16.17■□□□□ 0.18
TIMP1-201ENST00000218388 SMARCA5O60264 1052 aaPredicted RBP16.17■□□□□ 0.18
TIMP1-201ENST00000218388 NUCB1Q02818 461 aa16.17■□□□□ 0.18
TIMP1-201ENST00000218388 ZNF804AQ7Z570 1209 aa16.17■□□□□ 0.18
TIMP1-201ENST00000218388 VPS37DQ86XT2 251 aa16.17■□□□□ 0.18
TIMP1-201ENST00000218388 BCL11AQ9H165 835 aa16.17■□□□□ 0.18
TIMP1-201ENST00000218388 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
TIMP1-201ENST00000218388 SNAP23O00161 211 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 IARSP41252 1262 aaKnown RBP16.16■□□□□ 0.18
TIMP1-201ENST00000218388 TIMM10P62072 90 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 RASSF7Q02833 373 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 KIAA2012Q0VF49 1180 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
TIMP1-201ENST00000218388 XAGE2Q96GT9 111 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
TIMP1-201ENST00000218388 ZNF277Q9NRM2 450 aaPredicted RBP16.16■□□□□ 0.18
TIMP1-201ENST00000218388 GNL3LQ9NVN8 582 aaKnown RBP16.16■□□□□ 0.18
TIMP1-201ENST00000218388 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
TIMP1-201ENST00000218388 LMNB1P20700 586 aa16.15■□□□□ 0.18
TIMP1-201ENST00000218388 HIBADHP31937 336 aaKnown RBP16.15■□□□□ 0.18
TIMP1-201ENST00000218388 AOC3Q16853 763 aa16.15■□□□□ 0.18
TIMP1-201ENST00000218388 CCDC88AQ3V6T2 1871 aa16.15■□□□□ 0.18
TIMP1-201ENST00000218388 CCDC158Q5M9N0 1113 aa16.15■□□□□ 0.18
TIMP1-201ENST00000218388 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
TIMP1-201ENST00000218388 GPR101Q96P66 508 aaPredicted RBP16.15■□□□□ 0.18
TIMP1-201ENST00000218388 COA1Q9GZY4 146 aa16.15■□□□□ 0.18
TIMP1-201ENST00000218388 CCDC8Q9H0W5 538 aaPredicted RBP16.15■□□□□ 0.18
TIMP1-201ENST00000218388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.15■□□□□ 0.18
TIMP1-201ENST00000218388 KLRK1P26718 216 aa16.14■□□□□ 0.17
TIMP1-201ENST00000218388 NIM1KQ8IY84 436 aa16.14■□□□□ 0.17
TIMP1-201ENST00000218388 LNPKQ9C0E8 428 aa16.14■□□□□ 0.17
TIMP1-201ENST00000218388 IRS2Q9Y4H2 1338 aa16.14■□□□□ 0.17
TIMP1-201ENST00000218388 SBF1O95248 1867 aa16.14■□□□□ 0.17
TIMP1-201ENST00000218388 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
TIMP1-201ENST00000218388 WTIPA6NIX2 430 aaPredicted RBP16.13■□□□□ 0.17
TIMP1-201ENST00000218388 ADORA1P30542 326 aa16.13■□□□□ 0.17
TIMP1-201ENST00000218388 GYG1P46976 350 aa16.13■□□□□ 0.17
TIMP1-201ENST00000218388 TTC39AQ5SRH9 613 aa16.13■□□□□ 0.17
TIMP1-201ENST00000218388 FAM84BQ96KN1 310 aaPredicted RBP16.13■□□□□ 0.17
TIMP1-201ENST00000218388 DBNDD2Q9BQY9 259 aa16.13■□□□□ 0.17
TIMP1-201ENST00000218388 DBNLQ9UJU6 430 aaKnown RBP16.13■□□□□ 0.17
TIMP1-201ENST00000218388 MYH13Q9UKX3 1938 aa16.13■□□□□ 0.17
TIMP1-201ENST00000218388 CHD4Q14839 1912 aa16.12■□□□□ 0.17
TIMP1-201ENST00000218388 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
TIMP1-201ENST00000218388 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
TIMP1-201ENST00000218388 CCDC102BQ68D86 513 aa16.12■□□□□ 0.17
TIMP1-201ENST00000218388 PODNQ7Z5L7 613 aa16.12■□□□□ 0.17
TIMP1-201ENST00000218388 FBXO33Q7Z6M2 555 aa16.12■□□□□ 0.17
TIMP1-201ENST00000218388 TXNRD3Q86VQ6 643 aa16.12■□□□□ 0.17
TIMP1-201ENST00000218388 SRCAPQ6ZRS2 3230 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 SEMA3EO15041 775 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 ECE2O60344 883 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 BCAMP50895 628 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 DBNDD1Q9H9R9 158 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 CD209Q9NNX6 404 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
TIMP1-201ENST00000218388 RNF181Q9P0P0 153 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
TIMP1-201ENST00000218388 ERC2O15083 957 aa16.1■□□□□ 0.17
TIMP1-201ENST00000218388 IL1R1P14778 569 aa16.1■□□□□ 0.17
TIMP1-201ENST00000218388 MX1P20591 662 aa16.1■□□□□ 0.17
TIMP1-201ENST00000218388 PHKA1P46020 1223 aa16.1■□□□□ 0.17
TIMP1-201ENST00000218388 DOK7Q18PE1 504 aa16.1■□□□□ 0.17
TIMP1-201ENST00000218388 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
TIMP1-201ENST00000218388 ECHDC1Q9NTX5 307 aa16.1■□□□□ 0.17
TIMP1-201ENST00000218388 ZNRF3Q9ULT6 936 aa16.1■□□□□ 0.17
TIMP1-201ENST00000218388 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
TIMP1-201ENST00000218388 ZBTB22O15209 634 aa16.09■□□□□ 0.17
TIMP1-201ENST00000218388 ARID4AP29374 1257 aaPredicted RBP16.09■□□□□ 0.17
TIMP1-201ENST00000218388 TDRD7Q8NHU6 1098 aaKnown RBP16.09■□□□□ 0.17
TIMP1-201ENST00000218388 DENND2AQ9ULE3 1009 aa16.09■□□□□ 0.17
TIMP1-201ENST00000218388 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.16
TIMP1-201ENST00000218388 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
TIMP1-201ENST00000218388 C9orf131Q5VYM1 1079 aa16.08■□□□□ 0.16
TIMP1-201ENST00000218388 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
TIMP1-201ENST00000218388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.08■□□□□ 0.16
TIMP1-201ENST00000218388 AOX1Q06278 1338 aa16.08■□□□□ 0.16
TIMP1-201ENST00000218388 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.16
TIMP1-201ENST00000218388 PSME4Q14997 1843 aa16.08■□□□□ 0.16
TIMP1-201ENST00000218388 ATP5JP18859 108 aa16.07■□□□□ 0.16
TIMP1-201ENST00000218388 PRELPP51888 382 aa16.07■□□□□ 0.16
TIMP1-201ENST00000218388 PDS5AQ29RF7 1337 aaKnown RBP16.07■□□□□ 0.16
TIMP1-201ENST00000218388 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
TIMP1-201ENST00000218388 COL4A5P29400 1685 aa16.07■□□□□ 0.16
TIMP1-201ENST00000218388 FZD9O00144 591 aa16.06■□□□□ 0.16
TIMP1-201ENST00000218388 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
TIMP1-201ENST00000218388 PDE1AP54750 535 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms