RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 MCTP1Q6DN14 999 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 GPR108Q9NPR9 543 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 GLI3P10071 1580 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 GNPATO15228 680 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 EPB41L2O43491 1005 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 ZPR1O75312 459 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 CSF1RP07333 972 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 IGHMBP2P38935 993 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 LRRFIP1Q32MZ4 808 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 BLOC1S2Q6QNY1 142 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 ZNF34Q8IZ26 560 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 SLIT2O94813 1529 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 MSNP26038 577 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 NASPP49321 788 aaPredicted RBP10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 PKP1Q13835 747 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 CCDC152Q4G0S7 254 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 ZSCAN30Q86W11 494 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 PLA2G12BQ9BX93 195 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 AFF2P51816 1311 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 DTNBO60941 627 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 LIMCH1Q9UPQ0 1083 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
MTHFD1-201ENST00000216605 DOT1LQ8TEK3 1739 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 SLC27A2O14975 620 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 TAF5LO75529 589 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 IDH1O75874 414 aaKnown RBP10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 CAMTA2O94983 1202 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 PI16Q6UXB8 463 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 LINC00116Q8NCU8 138 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 MAP4K1Q92918 833 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 PPP1R9BQ96SB3 815 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 ZAP70P43403 619 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 AXDND1Q5T1B0 1012 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 MTERF4Q7Z6M4 381 aaKnown RBP10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 FNBP4Q8N3X1 1017 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 CCDC83Q8IWF9 413 aa10.56□□□□□ -0.72
MTHFD1-201ENST00000216605 PAPPAQ13219 1627 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 SNAP23O00161 211 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 STK3Q13188 491 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 NECTIN1Q15223 517 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 USPL1Q5W0Q7 1092 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 RTCBQ9Y3I0 505 aaKnown RBP10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 BCL9LQ86UU0 1499 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 RNF113AO15541 343 aaKnown RBP10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 MAPK8IP2Q13387 824 aaPredicted RBP10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 RUFY3Q7L099 469 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
MTHFD1-201ENST00000216605 PDE8BO95263 885 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 SLC5A1P13866 664 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 TERF1P54274 439 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 KLHL40Q2TBA0 621 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 SEPT12Q8IYM1 358 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.54□□□□□ -0.723e-6■■■■□ 25.4
MTHFD1-201ENST00000216605 SRP68Q9UHB9 627 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 OFD1O75665 1012 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 SCARF1Q14162 830 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 NBPF5PQ86XG9 351 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 QTRT2Q9H974 415 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 TRPC5Q9UL62 973 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 ZNF609O15014 1411 aa10.54□□□□□ -0.72
MTHFD1-201ENST00000216605 RFC4P35249 363 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 ERFEQ4G0M1 354 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 NECAB1Q8N987 351 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 AK7Q96M32 723 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 KRT32Q14532 448 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 PUM3Q15397 648 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 CLEC17AQ6ZS10 378 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 VPS37DQ86XT2 251 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 CDC5LQ99459 802 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 PLCD4Q9BRC7 762 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 HELLSQ9NRZ9 838 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 HMG20BQ9P0W2 317 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 IQSEC3Q9UPP2 1182 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 NUP188Q5SRE5 1749 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 PHKA1P46020 1223 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 HS1BP3Q53T59 392 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 SLC9C2Q5TAH2 1124 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 NEK1Q96PY6 1258 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 LRRC2Q9BYS8 371 aa10.53□□□□□ -0.72
MTHFD1-201ENST00000216605 PRPF40AO75400 957 aaKnown RBP10.52□□□□□ -0.72
MTHFD1-201ENST00000216605 HAND2P61296 217 aa10.52□□□□□ -0.72
MTHFD1-201ENST00000216605 CCDC102BQ68D86 513 aa10.52□□□□□ -0.72
MTHFD1-201ENST00000216605 LPIN2Q92539 896 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms