RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CTNNA3Q9UI47 895 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 RIPOR2Q9Y4F9 1068 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 UBN2Q6ZU65 1347 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 CRKLP46109 303 aaKnown RBP9.79□□□□□ -0.84
VAMP3-201ENST00000054666 EIF5P55010 431 aaKnown RBP9.79□□□□□ -0.84
VAMP3-201ENST00000054666 TTF1Q15361 905 aaPredicted RBP9.79□□□□□ -0.84
VAMP3-201ENST00000054666 PARP10Q53GL7 1025 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
VAMP3-201ENST00000054666 APPBP2Q92624 585 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
VAMP3-201ENST00000054666 CHMP4CQ96CF2 233 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 NSFL1CQ9UNZ2 370 aaKnown RBP9.79□□□□□ -0.84
VAMP3-201ENST00000054666 KIF3AQ9Y496 699 aa9.79□□□□□ -0.84
VAMP3-201ENST00000054666 RREB1Q92766 1687 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 SLIT2O94813 1529 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 MROH5Q6ZUA9 1318 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 M0R2C6 588 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 TOM1O60784 492 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 ZAP70P43403 619 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 KRT85P78386 507 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 BRF1Q92994 677 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 UTP14AQ9BVJ6 771 aaKnown RBP9.78□□□□□ -0.84
VAMP3-201ENST00000054666 ZNF652Q9Y2D9 606 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 LAMA4Q16363 1823 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 GADD45BO75293 160 aaPredicted RBP9.78□□□□□ -0.84
VAMP3-201ENST00000054666 PDE8BO95263 885 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 UQCRFS1P1P0C7P4 283 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
VAMP3-201ENST00000054666 PUM3Q15397 648 aaKnown RBP9.78□□□□□ -0.84
VAMP3-201ENST00000054666 IMMTQ16891 758 aaKnown RBP9.78□□□□□ -0.84
VAMP3-201ENST00000054666 SLFNL1Q499Z3 407 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 CCDC183Q5T5S1 534 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 STOX1Q6ZVD7 989 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 MARCH10Q8NA82 808 aaPredicted RBP9.78□□□□□ -0.84
VAMP3-201ENST00000054666 FAM184AQ8NB25 1140 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 OSBP2Q969R2 916 aa9.78□□□□□ -0.84
VAMP3-201ENST00000054666 ZNF512BQ96KM6 892 aaPredicted RBP9.78□□□□□ -0.84
VAMP3-201ENST00000054666 ARAP2Q8WZ64 1704 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 E7EWF7 191 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 SLC5A1P13866 664 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 DNM1Q05193 864 aaKnown RBP9.77□□□□□ -0.85
VAMP3-201ENST00000054666 SCARF1Q14162 830 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 INTS5Q6P9B9 1019 aaKnown RBP9.77□□□□□ -0.85
VAMP3-201ENST00000054666 CDC37L1Q7L3B6 337 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 MPHOSPH8Q99549 860 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 TSPY26PQ9H489 355 aa9.77□□□□□ -0.85
VAMP3-201ENST00000054666 H3BQV1 296 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 LETM1O95202 739 aaPredicted RBP9.76□□□□□ -0.85
VAMP3-201ENST00000054666 MCAMP43121 646 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 CCDC152Q4G0S7 254 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 IFFO2Q5TF58 517 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 VGLL2Q8N8G2 317 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 LPIN2Q92539 896 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 LLPHQ9BRT6 129 aaKnown RBP9.76□□□□□ -0.85
VAMP3-201ENST00000054666 LRRC2Q9BYS8 371 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 LAMB2P55268 1798 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 FAM177BA6PVY3 158 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 CAMTA2O94983 1202 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 HMGN5P82970 282 aaKnown RBP9.76□□□□□ -0.85
VAMP3-201ENST00000054666 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 NAP1L2Q9ULW6 460 aaPredicted RBP9.76□□□□□ -0.85
VAMP3-201ENST00000054666 NIP7Q9Y221 180 aaKnown RBP eCLIP9.76□□□□□ -0.85
VAMP3-201ENST00000054666 ATRNO75882 1429 aa9.76□□□□□ -0.85
VAMP3-201ENST00000054666 GPAA1O43292 621 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 PFKFB2O60825 505 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-201ENST00000054666 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-201ENST00000054666 IGHMBP2P38935 993 aaKnown RBP9.75□□□□□ -0.85
VAMP3-201ENST00000054666 SUSD4Q5VX71 490 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 PI16Q6UXB8 463 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
VAMP3-201ENST00000054666 FERMT3Q86UX7 667 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 AKAP11Q9UKA4 1901 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 DTNBO60941 627 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 IDH1O75874 414 aaKnown RBP9.75□□□□□ -0.85
VAMP3-201ENST00000054666 ADD2P35612 726 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 SCRN1Q12765 414 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 ITPK1Q13572 414 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 CCDC102BQ68D86 513 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 PPP1R9BQ96SB3 815 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 AGXT2Q9BYV1 514 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 SCAND2PQ9GZW5 306 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-201ENST00000054666 COL5A3P25940 1745 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-201ENST00000054666 RTL9Q8NET4 1388 aa9.75□□□□□ -0.85
VAMP3-201ENST00000054666 ELP1O95163 1332 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 JAK2O60674 1132 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 PHKA1P46020 1223 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 APOBRQ0VD83 1088 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 UBE3CQ15386 1083 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 SLC9C2Q5TAH2 1124 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
VAMP3-201ENST00000054666 DDX60Q8IY21 1712 aaKnown RBP9.74□□□□□ -0.85
VAMP3-201ENST00000054666 ZNF831Q5JPB2 1677 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 MYH14Q7Z406 1995 aaKnown RBP9.74□□□□□ -0.85
VAMP3-201ENST00000054666 GOLGA6L4A6NEF3 574 aa9.74□□□□□ -0.85
VAMP3-201ENST00000054666 ZNF213O14771 459 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms