RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 CrklP47941 303 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Tecpr2Q3UH45 1423 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Spata24Q6P926 205 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 CenppQ9CZ92 286 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Duxf3A0A0N4SV92 674 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ppp1r10Q80W00 888 aaKnown RBP15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Slx4ipQ9D7Y9 413 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Nf2P46662 596 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Hdhd2Q3UGR5 259 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Arhgef28P97433 1693 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Pdcd11Q6NS46 1862 aaKnown RBP15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Mcmdc2E9Q956 681 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 RalylQ8BTF8 293 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Zfp853A0A1D5RM95 733 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 P4ha1Q60715 534 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Cyp2ab1S4R196 498 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Cfap73J3QPZ5 306 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Hook2Q7TMK6 716 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Xrcc4Q924T3 326 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Tmco5aQ9D9D5 303 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ncoa4Q5U4H9 625 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 HellsQ60848 821 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 PtprmP28828 1452 aa15.11■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Pdia3P27773 505 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Cfap157Q0VFX2 523 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ift122Q6NWV3 1182 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Aldh8a1Q8BH00 487 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 BbxQ8VBW5 907 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Kdm5aQ3UXZ9 1690 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Gas8Q60779 478 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Glg1Q61543 1175 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Klhl30Q8C3F7 581 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 ClasrpQ8CFC7 668 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Gm10093D3YYI8 482 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Hdac1O09106 482 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Eya1P97767 591 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Arhgef1Q61210 920 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Txnrd1Q9JMH6 613 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Letm1Q9Z2I0 738 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Scaf11E9PZM7 1456 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Calm1P0DP26 149 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Calm2P0DP27 149 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Calm3P0DP28 149 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Fermt1P59113 677 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Lrsam1Q80ZI6 727 aa15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Mrpl12Q9DB15 201 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Iqgap1Q9JKF1 1657 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Med14A2ABV5 1459 aaKnown RBP15.1■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Exoc1Q8R3S6 894 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Sycp2lA0A0M3U1B0 842 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Kifc2O08672 792 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Gnat2P50149 354 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ddb1Q3U1J4 1140 aaKnown RBP15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Hdac9Q99N13 588 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Znf394Q9Z1D9 521 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Mroh1E0CZ22 1640 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Sun3Q5SS91 320 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 ThemisQ8BGW0 636 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Pik3ap1Q9EQ32 811 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 AmfrQ9R049 643 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Setdb1O88974 1307 aa15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 SltmQ8CH25 1031 aaKnown RBP15.09■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Igflr1Q3U4N7 345 aa15.08■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Asic1Q6NXK8 526 aa15.08■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Fam186bD3Z420 943 aa15.08■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Znf692Q3U381 531 aa15.08■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Snx13Q6PHS6 957 aa15.08■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Krt7Q9DCV7 457 aa15.08■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Kdm6aO70546 1401 aa15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Brd1E9PZ26 1189 aaKnown RBP15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Sptlc2P97363 560 aaKnown RBP15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Snx25Q3ZT31 840 aa15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Nek11Q8C0Q4 628 aa15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Lrrc59Q922Q8 307 aaKnown RBP15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Gse1Q3U3C9 1213 aa15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 4921504E06RikQ8CET2 560 aa15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Tubb4aQ9D6F9 444 aa15.08■□□□□ 0
Rnf40-202ENSMUST00000205694 Rims2Q9EQZ7 1530 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Ccdc42Q5SV66 316 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Sde2Q8K1J5 448 aaKnown RBP15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Hmgb1P63158 215 aaKnown RBP15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Znf697Q569E7 569 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Ano1Q8BHY3 960 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Serpinc1P32261 465 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Lmod1Q8BVA4 595 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Palm3A2TJV2 734 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Tagap1P0CAX8 505 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Ercc3P49135 783 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Ddx17Q501J6 650 aaKnown RBP15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Fgfr1opQ66JX5 399 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Pm20d1Q8C165 503 aa15.07■□□□□ 0
Rnf40-202ENSMUST00000205694 Rreb1Q3UH06 1700 aaKnown RBP15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 Ccdc170D3YXL0 722 aa15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 MarcksP26645 309 aaKnown RBP15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 Clul1Q3ZRW6 464 aa15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 Psmd1Q3TXS7 953 aa15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 Smarcc2Q6PDG5 1213 aa15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 Noc2lQ9WV70 747 aaKnown RBP15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 Epb41l2O70318 988 aaKnown RBP15.06■□□□□ 0
Rnf40-202ENSMUST00000205694 Ptcd1Q8C2E4 695 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms