RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Mtmr3Q8K296 1196 aa12.57□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Bcl9Q9D219 1425 aa12.57□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Tom1O88746 492 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Ddb1Q3U1J4 1140 aaKnown RBP12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Ppp4r3aQ6P2K6 820 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Dusp9Q7TNL7 452 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 StrbpQ91WM1 672 aaKnown RBP12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Robo1O89026 1612 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Ubn2Q80WC1 1314 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Gm21969J3QJZ1 289 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 RubcnlQ3TD16 648 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Zkscan8Q8BSL0 588 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Lrrc2Q8VDB8 371 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Kcnq3Q8K3F6 873 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Lonrf3Q9D4H7 753 aa12.56□□□□□ -0.4
Col9a1-201ENSMUST00000054588 InsrrQ9WTL4 1300 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Prl7a2O54831 253 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Myl3P09542 204 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Cfap69Q8BH53 942 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Cdca8Q8BHX3 289 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Nup133Q8R0G9 1155 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Ccdc47Q9D024 483 aaKnown RBP12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Znf704Q9ERQ3 566 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Sult6b1P0CC03 303 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Nlrp9bQ66X22 1003 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Zeb2Q9R0G7 1215 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Cops6O88545 324 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 NapbP28663 298 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 IncenpQ9WU62 880 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Pde3aQ9Z0X4 1141 aa12.55□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Col14a1Q80X19 1797 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Smarcc1P97496 1104 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 IntuQ059U7 942 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 DbnlQ62418 436 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Kank4Q6P9J5 1016 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Cep55Q8BT07 462 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Prpf4bQ61136 1007 aaKnown RBP12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 TrhQ62361 256 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Sp8Q8BMJ8 486 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Tmem143Q8VD26 458 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Csrnp1P59054 583 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Rbm26Q6NZN0 1012 aaKnown RBP12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Drc7Q6V3W6 876 aa12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Mrpl44Q9CY73 333 aaKnown RBP12.54□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Fbxl16A2RT62 479 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Tnnt2P50752 301 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 CebpzP53569 1052 aaKnown RBP12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Srek1Q8BZX4 494 aaKnown RBP12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Ccdc94Q9D6J3 314 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Brpf3B2KF05 1204 aaKnown RBP12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 NpeppsQ11011 920 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Nlrp1aQ2LKU9 1182 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Ubash3aQ3V3E1 624 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Slfnl1Q8BHW9 410 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Tut1Q8R3F9 869 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Rufy2Q8R4C2 606 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Osbpl5Q9ER64 874 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 TnksQ6PFX9 1320 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Shank2Q80Z38 1476 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Prl3d3A0A0M6L0J6 224 aa12.53□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Ccdc112A0AUP1 442 aa12.52□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Tpm3-rs7D3Z2H9 248 aa12.52□□□□□ -0.4
Col9a1-201ENSMUST00000054588 1700113H08RikE9Q9Q5 327 aa12.52□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Dnaaf4Q8R368 420 aa12.52□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Pdia6Q922R8 440 aaKnown RBP12.52□□□□□ -0.4
Col9a1-201ENSMUST00000054588 BrapQ99MP8 591 aa12.52□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Col15a1O35206 1367 aa12.52□□□□□ -0.4
Col9a1-201ENSMUST00000054588 Lins1Q3U1D0 764 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Gm12185Q5NCB2 835 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Inpp5bQ8K337 993 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Ccdc39Q9D5Y1 937 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Clec11aO88200 328 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Sass6Q80UK7 654 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Cnot6lQ8VEG6 555 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Zbtb1Q91VL9 713 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 AceP09470 1312 aa12.52□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Stx1aO35526 288 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Irf5P56477 497 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Gm21985Q6P6P5 1106 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Znf653Q6YND2 615 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Ripor2Q80U16 1078 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Pik3ap1Q9EQ32 811 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Nfe2l3Q9WTM4 660 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Zc3h12cQ5DTV4 884 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Zfp251Q6PCX8 632 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Kcnf1Q7TSH7 493 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Lrrc59Q922Q8 307 aaKnown RBP12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Rai14Q9EP71 979 aaKnown RBP12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Mctp2Q5RJH2 878 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Serpina10Q8R121 448 aa12.51□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Eya2O08575 532 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Ctdnep1Q3TP92 244 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Abtb2Q7TQI7 1024 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Dcaf5Q80T85 946 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Fbxo2Q80UW2 297 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Sgsm1Q8BPQ7 1093 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Oas2E9Q9A9 742 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 U2af1l4Q8BGJ9 220 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Tmx1Q8VBT0 278 aa12.5□□□□□ -0.41
Col9a1-201ENSMUST00000054588 Cdca7Q9D0M2 382 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms