RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FBXO9Q9UK97 447 aaPredicted RBP10.55□□□□□ -0.72
LINC00339-213ENST00000642137 DOPEY2Q9Y3R5 2298 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 TRBV5-5A0A0J9YX44 114 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 SERPINA3P01011 423 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 DANCRP0C864 163 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 GABRA5P31644 462 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 MST1LQ2TV78 715 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 ALKBH6Q3KRA9 238 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 Q499Y3 187 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 MUC15Q8N387 334 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 OR8G5Q8NG78 346 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 OR10AC1Q8NH08 325 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 RGP1Q92546 391 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-213ENST00000642137 THRSPQ92748 146 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 CLEC4MQ9H2X3 399 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-213ENST00000642137 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 CYSLTR2Q9NS75 346 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 ZNF275Q9NSD4 429 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-213ENST00000642137 FAIMQ9NVQ4 179 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 NDUFB11Q9NX14 153 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 TAAR3PQ9P1P4 343 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 CGGBP1Q9UFW8 167 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-213ENST00000642137 FZR1Q9UM11 496 aa10.54□□□□□ -0.72
LINC00339-213ENST00000642137 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-213ENST00000642137 ABCA4P78363 2273 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 ZNF816-ZNF321PA0A0X1KG74 233 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-213ENST00000642137 SC5DO75845 299 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 GATBO75879 557 aaKnown RBP10.53□□□□□ -0.72
LINC00339-213ENST00000642137 CST4P01036 141 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 HLA-DPB1P04440 258 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 GALP22466 123 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 ACKR3P25106 362 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 RPS25P62851 125 aaKnown RBP10.53□□□□□ -0.72
LINC00339-213ENST00000642137 ACSM3Q53FZ2 586 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 TMEM255AQ5JRV8 349 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 AGAP6Q5VW22 663 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 FTMTQ8N4E7 242 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 OR56B2PQ8NGI1 322 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 OR51A4Q8NGJ6 313 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 OR13F1Q8NGS4 319 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 OR13C3Q8NGS6 347 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 FGGYQ96C11 551 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 YIPF6Q96EC8 236 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 SYT3Q9BQG1 590 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 TMED9Q9BVK6 235 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 SLC22A4Q9H015 551 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 CBLN4Q9NTU7 201 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 TMEM100Q9NV29 134 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 MRPL15Q9P015 296 aaKnown RBP10.53□□□□□ -0.72
LINC00339-213ENST00000642137 MYEF2Q9P2K5 600 aaKnown RBP10.53□□□□□ -0.72
LINC00339-213ENST00000642137 ENPP5Q9UJA9 477 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 DHDHQ9UQ10 334 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 PIGLQ9Y2B2 252 aa10.53□□□□□ -0.72
LINC00339-213ENST00000642137 HELZ2Q9BYK8 2649 aaKnown RBP10.52□□□□□ -0.73
LINC00339-213ENST00000642137 A0A1B0GWJ7 208 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 ZNF879B4DU55 563 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 H3BSH0 61 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 CD8AP01732 235 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 RAF1P04049 648 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 CD2P06729 351 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 OCM2P0CE71 109 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 CD36P16671 472 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 MAPK3P27361 379 aaPredicted RBP10.52□□□□□ -0.73
LINC00339-213ENST00000642137 MAGEB1P43366 347 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 MMP15P51511 669 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 PRSS12P56730 875 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 TMEM42Q69YG0 159 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 CD200R1LQ6Q8B3 271 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 PAMR1Q6UXH9 720 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 TMEM91Q6ZNR0 172 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 C20orf204Q6ZNR8 217 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 TMEM200AQ86VY9 491 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 SERPINA12Q8IW75 414 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 OR5AS1Q8N127 324 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 PARP16Q8N5Y8 322 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 OR13G1Q8NGZ3 307 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 TSEN15Q8WW01 171 aaKnown RBP10.52□□□□□ -0.73
LINC00339-213ENST00000642137 PP6455Q8WZ26 134 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 PIGCQ92535 297 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 PIGTQ969N2 578 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 TMEM203Q969S6 136 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 TMIGD2Q96BF3 282 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 SLC30A2Q9BRI3 323 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 MS4A5Q9H3V2 200 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 UBTD1Q9HAC8 227 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 MPC1Q9Y5U8 109 aa10.52□□□□□ -0.73
LINC00339-213ENST00000642137 SPTAN1Q13813 2472 aaKnown RBP10.51□□□□□ -0.73
LINC00339-213ENST00000642137 PLCE1Q9P212 2302 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 TRBV5-7A0A0A0MS05 114 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 A0A1W2PPW3 197 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 GMDSO60547 372 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 LMX1BO60663 402 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 GPX5O75715 221 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms