RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ZNF85Q03923 595 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 GALEQ14376 348 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 MED22Q15528 200 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 TAF13Q15543 124 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 TBCEQ15813 527 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-222ENST00000641587 TP53I3Q53FA7 332 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 TEX30Q5JUR7 227 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 FAM27BQ5VT28 67 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 DCAF12L2Q5VW00 463 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 RGS7BPQ6MZT1 257 aaPredicted RBP8.49□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF627Q7L945 461 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 SSX6Q7RTT6 188 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 KRT77Q7Z794 578 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 SKA3Q8IX90 412 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 YIPF7Q8N8F6 280 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 OR4M2Q8NGB6 313 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 ASB17Q8WXJ9 295 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 SIGLEC11Q96RL6 698 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 ABHD6Q9BV23 337 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF747Q9BV97 191 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 JAM3Q9BX67 310 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 C1orf198Q9H425 327 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 CENPMQ9NSP4 180 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 CYB5R1Q9UHQ9 305 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 GNG8Q9UK08 70 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 LHFPL6Q9Y693 200 aa8.49□□□□□ -1.05
PHGDH-222ENST00000641587 J3QLW9 94 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 RER1O15258 196 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 MAGEB4O15481 346 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 UBL3O95164 117 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 MT-ND5P03915 603 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 LCKP06239 509 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 H2BFMP0C1H6 154 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 LIMS3P0CW19 117 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 LIMS4P0CW20 117 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 HKR1P10072 659 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF19P17023 458 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF32P17041 273 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 ALOX5APP20292 161 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 WNT4P56705 351 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 LCN2P80188 198 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 EMX1Q04741 257 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 SCRN3Q0VDG4 424 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 IRF3Q14653 427 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 TSTQ16762 297 aaKnown RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 SLC36A2Q495M3 483 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 NRN1LQ496H8 165 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 TMEM255AQ5JRV8 349 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 OR2G6Q5TZ20 316 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 TMEM53Q6P2H8 277 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 KCTD18Q6PI47 426 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 LRRN1Q6UXK5 716 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 CFAP77Q6ZQR2 320 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 PLEKHG7Q6ZR37 379 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF367Q7RTV3 350 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 SIGLECL1Q8N7X8 197 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 GJC3Q8NFK1 279 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 NANPQ8TBE9 248 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 SPRYD4Q8WW59 207 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 FCGR1BQ92637 280 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 RORBQ92753 470 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 DVL3Q92997 716 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 RAB39BQ96DA2 213 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 SLAMF6Q96DU3 332 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 C4orf36Q96KX1 117 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 C1orf147Q96MC9 270 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 AMELYQ99218 206 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 ACOT13Q9NPJ3 140 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 PLEK2Q9NYT0 353 aa8.48□□□□□ -1.05
PHGDH-222ENST00000641587 CAB39Q9Y376 341 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-222ENST00000641587 IGLV3-9A0A075B6K5 115 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 IGHV1-69-2A0A0G2JMI3 117 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 DNAJC9-AS1A6NH13 148 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 METTL15A6NJ78 407 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 CLDN25C9JDP6 229 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF878C9JN71 531 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 SGCEO43556 437 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 DOK2O60496 412 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 RPP14O95059 124 aaKnown RBP8.47□□□□□ -1.05
PHGDH-222ENST00000641587 SERPINA5P05154 406 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 ZFP36P26651 326 aaKnown RBP8.47□□□□□ -1.05
PHGDH-222ENST00000641587 HSD11B1P28845 292 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 RAD52P43351 418 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 HTR5AP47898 357 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 RIDAP52758 137 aaKnown RBP8.47□□□□□ -1.05
PHGDH-222ENST00000641587 KLF3P57682 345 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-222ENST00000641587 OR12D2P58182 307 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 EGR3Q06889 387 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 SPHARQ15513 63 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 PCK2Q16822 640 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 CDONQ4KMG0 1287 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 MIDNQ504T8 468 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 RNLSQ5VYX0 342 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF774Q6NX45 483 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 SHISA2Q6UWI4 295 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 TREML4Q6UXN2 200 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 KLBQ86Z14 1044 aa8.47□□□□□ -1.05
PHGDH-222ENST00000641587 BCL6BQ8N143 479 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-222ENST00000641587 NANOGP1Q8N7R0 232 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms