RNA–Protein interactions for RNA: ENST00000640632.1

KCNMA1-287, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 2 BASIC

Gene KCNMA1, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-287	ENST00000640632	LEMD1	Q68G75	181 aa		11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632	C11orf42	Q8N5U0	333 aa		11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632	OR52E1	Q8NGJ3	308 aa		11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632	FAM213B	Q8TBF2	198 aa		11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632	AQP3	Q92482	292 aa		11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632	GSX1	Q9H4S2	264 aa	Predicted RBP	11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632	C5orf66	Q9H5L9	145 aa		11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632	LRFN1	Q9P244	771 aa		11.65	□□□□□ -0.54
KCNMA1-287	ENST00000640632		A0A0A6YYD5	115 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PLRG1	O43660	514 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CBR3	O75828	277 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	RAC2	P15153	192 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	APOBEC1	P41238	236 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	COL10A1	Q03692	680 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	BATF	Q16520	125 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	SLC25A26	Q70HW3	274 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ADGRE4P	Q86SQ3	457 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	MRPL41	Q8IXM3	137 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	EXD3	Q8N9H8	876 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PCSK9	Q8NBP7	692 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	SNIP1	Q8TAD8	396 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NKD1	Q969G9	470 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CMKLR1	Q99788	373 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ALG12	Q9BV10	488 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NUDT9	Q9BW91	350 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	SH3BGRL3	Q9H299	93 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	TCFL5	Q9UL49	500 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CHD3	Q12873	2000 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NDUFB2	O95178	105 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PI3	P19957	117 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PRLHR	P49683	370 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	SUPT4H1	P63272	117 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CCL20	P78556	96 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PMS2P11	Q13670	270 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NKAIN1	Q4KMZ8	207 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	MRPL2	Q5T653	305 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	LINC01590	Q5TEZ4	76 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ASPHD2	Q6ICH7	369 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	RCBTB1	Q8NDN9	531 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	OR2L2	Q8NH16	312 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	IFI44	Q8TCB0	444 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PLD4	Q96BZ4	506 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	RSPRY1	Q96DX4	576 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	GINS3	Q9BRX5	216 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ADAM29	Q9UKF5	820 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PPIL1	Q9Y3C6	166 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	EML5	Q05BV3	1969 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	COCH	O43405	550 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	SCGB1D1	O95968	90 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	RPL4	P36578	427 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	MMP16	P51512	607 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	RND2	P52198	227 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	RND3	P61587	244 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	TRA2B	P62995	288 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	FAM78A	Q5JUQ0	283 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	C17orf99	Q6UX52	265 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632		Q6ZVL8	140 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	TMEM156	Q8N614	296 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CYB561D1	Q8N8Q1	229 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	COX18	Q8N8Q8	333 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	DNASE2B	Q8WZ79	361 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	TMEM18	Q96B42	140 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	HIST1H2AA	Q96QV6	131 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PRRX2	Q99811	253 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	AIF1L	Q9BQI0	150 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NMNAT2	Q9BZQ4	307 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PLAGL1	Q9UM63	463 aa		11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	MRPS18B	Q9Y676	258 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-287	ENST00000640632	WIPF3	A6NGB9	483 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PQBP1	O60828	265 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	TFPI2	P48307	235 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	VASP	P50552	380 aa	Predicted RBP	11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	TNFSF10	P50591	281 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ELL	P55199	621 aa	Predicted RBP	11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	DUSP8	Q13202	625 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	SGCG	Q13326	291 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NFATC4	Q14934	902 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ZNF260	Q3ZCT1	412 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ZNF793	Q6ZN11	406 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NOXO1	Q8NFA2	376 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ZNF689	Q96CS4	500 aa	Predicted RBP	11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CMBL	Q96DG6	245 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	C5orf34	Q96MH7	638 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	OR2J1	Q9GZK6	312 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	PCED1A	Q9H1Q7	454 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	GLRX2	Q9NS18	164 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	FOXJ2	Q9P0K8	574 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	GPR132	Q9UNW8	380 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	MRPS23	Q9Y3D9	190 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	TRBV24-1	A0A075B6N3	115 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	C20orf202	A1L168	122 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CLDN34	H7C241	214 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	HPRT1	P00492	218 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	NGFR	P08138	427 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	CHRM2	P08172	466 aa		11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	GSTP1	P09211	210 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-287	ENST00000640632	FOLR1	P15328	257 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms