RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RAD51DO75771 328 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 QDPRP09417 244 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 GABREP78334 506 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 TOMM20Q15388 145 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 PDSS1Q5T2R2 415 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 LPCAT3Q6P1A2 487 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 OR5H2Q8NGV7 314 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 ZC3H10Q96K80 434 aaKnown RBP12.93□□□□□ -0.34
SCARB2-221ENST00000640341 SMIM3Q9BZL3 60 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 LPAR5Q9H1C0 372 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 GDF9O60383 454 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 FBXO24O75426 580 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 CRHP06850 196 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 APOBEC1P41238 236 aaKnown RBP12.92□□□□□ -0.34
SCARB2-221ENST00000640341 CX3CR1P49238 355 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 HAGHLQ6PII5 290 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-221ENST00000640341 OR5AP2Q8NGF4 316 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 TERB2Q8NHR7 220 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 PIGTQ969N2 578 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 AKIRIN1Q9H9L7 192 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-221ENST00000640341 EHFQ9NZC4 300 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 FBXO9Q9UK97 447 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-221ENST00000640341 TMEM131Q92545 1883 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 ABCD4O14678 606 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 BPNT1O95861 308 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 IGHG1P01857 330 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 C1QL2Q7Z5L3 287 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF501Q96CX3 271 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF768Q9H5H4 540 aaKnown RBP12.92□□□□□ -0.34
SCARB2-221ENST00000640341 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 OR5AC2Q9NZP5 309 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 MLXQ9UH92 298 aa12.92□□□□□ -0.34
SCARB2-221ENST00000640341 A0A0A6YYH2 397 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 A6NJ64 397 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
SCARB2-221ENST00000640341 SCGB1D2O95969 90 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 GABRR1P24046 479 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 GUCA1AP43080 201 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-221ENST00000640341 NKAIN1Q4KMZ8 207 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 CLEC18BQ6UXF7 455 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 CCDC36Q8IYA8 594 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 PUSL1Q8N0Z8 303 aaKnown RBP12.91□□□□□ -0.34
SCARB2-221ENST00000640341 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 ZSCAN4Q8NAM6 433 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-221ENST00000640341 EDAQ92838 391 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 PGAM5Q96HS1 289 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 S100A13Q99584 98 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 BARX1Q9HBU1 254 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-221ENST00000640341 STMND1H3BQB6 276 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 WDPCPO95876 746 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 ACTL6AO96019 429 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-221ENST00000640341 D2HGDHQ8N465 521 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 ST8SIA1Q92185 356 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 C5orf66Q9H5L9 145 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 B3GAT1Q9P2W7 334 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 LOC390937A0A1W2PQ73 354 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 TTLL8A6PVC2 850 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 H0YIZ8 118 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 CDC14BO60729 498 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 SERPINA5P05154 406 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 RAB6AP20340 208 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 TMEM50BP56557 158 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 CLDN17P56750 224 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 CLEC9AQ6UXN8 241 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 ANKRD37Q7Z713 158 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 BATF2Q8N1L9 274 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF441Q8N8Z8 693 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 CLRN3Q8NCR9 226 aa12.91□□□□□ -0.34
SCARB2-221ENST00000640341 MELTFP08582 738 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 TPT1P13693 172 aaKnown RBP12.9□□□□□ -0.34
SCARB2-221ENST00000640341 FAHP16930 419 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 CFPP27918 469 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 SNU13P55769 128 aaKnown RBP12.9□□□□□ -0.34
SCARB2-221ENST00000640341 BAP18Q8IXM2 172 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 ZDHHC22Q8N966 263 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 WDR77Q9BQA1 342 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-221ENST00000640341 CRB3Q9BUF7 120 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 B3GALT5Q9Y2C3 310 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 E9PLN8 166 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 SCRG1O75711 98 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 IGLV3-19P01714 112 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 IGHMP01871 453 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 SLC25A4P12235 298 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 HIST1H1DP16402 221 aaKnown RBP12.9□□□□□ -0.34
SCARB2-221ENST00000640341 NXPH1P58417 271 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 RAB32Q13637 225 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF345Q14585 488 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 H3F3CQ6NXT2 135 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 PIGMQ9H3S5 423 aa12.9□□□□□ -0.34
SCARB2-221ENST00000640341 ATG12O94817 140 aa12.9□□□□□ -0.35
SCARB2-221ENST00000640341 TMEM128Q5BJH2 165 aa12.9□□□□□ -0.35
SCARB2-221ENST00000640341 DEGS2Q6QHC5 323 aa12.9□□□□□ -0.35
SCARB2-221ENST00000640341 DRAM2Q6UX65 266 aa12.9□□□□□ -0.35
SCARB2-221ENST00000640341 ZFP82Q8N141 532 aa12.9□□□□□ -0.35
SCARB2-221ENST00000640341 PIK3IP1Q96FE7 263 aa12.9□□□□□ -0.35
SCARB2-221ENST00000640341 OR10C1Q96KK4 312 aa12.9□□□□□ -0.35
SCARB2-221ENST00000640341 RBM24Q9BX46 236 aaKnown RBP12.9□□□□□ -0.35
SCARB2-221ENST00000640341 ALKBH4Q9NXW9 302 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms