RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CTLA4P16410 223 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 AMY2BP19961 511 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 RBM34P42696 430 aaKnown RBP8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 DYNLT3P51808 116 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 DUSP7Q16829 419 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 DGUOKQ16854 277 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 ABCA11PQ4W5N1 156 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 RBM45Q8IUH3 476 aaKnown RBP8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 KIRREL3Q8IZU9 778 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 TMEM255BQ8WV15 326 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 DUX3Q96PT4 197 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 WDR55Q9H6Y2 383 aaPredicted RBP8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 PPCSQ9HAB8 311 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 ELL3Q9HB65 397 aaPredicted RBP8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 ZFP57Q9NU63 452 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 GRHPRQ9UBQ7 328 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 RAP2CQ9Y3L5 183 aa8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 TBL2Q9Y4P3 447 aaKnown RBP8.75□□□□□ -1.01
PTP4A1-207ENST00000639568 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 CCL24O00175 119 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 SIGLEC5O15389 551 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 BPGMP07738 259 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 ACSM4P0C7M7 580 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 IDO1P14902 403 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 CENPAP49450 140 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 ERVFRD-1P60508 538 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 SLC34A1Q06495 639 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 MPP2Q14168 576 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 WDR82Q6UXN9 313 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 ZNF788Q6ZQV5 615 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 C16orf82Q7Z2V1 217 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 DHDDSQ86SQ9 333 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 OR5K1Q8NHB7 308 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 TMEM239Q8WW34 195 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 GAFA1Q96PS6 74 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 PITX2Q99697 317 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 PRSS27Q9BQR3 290 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 PAIP1Q9H074 479 aaKnown RBP8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 VNN3Q9NY84 501 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 ADA2Q9NZK5 511 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 SCOCQ9UIL1 159 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 MED31Q9Y3C7 131 aa8.74□□□□□ -1.01
PTP4A1-207ENST00000639568 ANKRD30BLA7E2S9 258 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 LDLRAD4O15165 306 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 AHCYL1O43865 530 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 SLC16A7O60669 478 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 SPAG7O75391 227 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 KHDRBS3O75525 346 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 SHBGP04278 402 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 ACAA1P09110 424 aaPredicted RBP8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 SDHAP31040 664 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 GABRA2P47869 451 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 POLR2JP52435 117 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 CAPZA1P52907 286 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 SLC25A1P53007 311 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 WDR4P57081 412 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 ABCE1P61221 599 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 CSNK2BP67870 215 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 SPIBQ01892 262 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 ZNF260Q3ZCT1 412 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 C9orf152Q5JTZ5 239 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 FAM27D1Q5T7N8 215 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 PLBD1Q6P4A8 553 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 C18orf65Q6ZTR6 163 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 ZNF329Q86UD4 541 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 NAA40Q86UY6 237 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 NKAIN4Q8IVV8 208 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 ZNF695Q8IW36 515 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 C11orf53Q8IXP5 236 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 TMEM185AQ8NFB2 350 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 OR1M1Q8NGA1 313 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 EPS8L3Q8TE67 593 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 GTF2H4Q92759 462 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 CDRT15Q96T59 188 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 TMEM38AQ9H6F2 299 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 COA3Q9Y2R0 106 aaPredicted RBP8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 LRP12Q9Y561 859 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 HILPDAQ9Y5L2 63 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 LYVE1Q9Y5Y7 322 aa8.73□□□□□ -1.01
PTP4A1-207ENST00000639568 IGLV1-36A0A0B4J1U3 117 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 PRSS37A4D1T9 235 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 CDIPTO14735 213 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 TIPRLO75663 272 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 TFF1P04155 84 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 PGA5P0DJD9 388 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 PPIBP23284 216 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 TPTEP56180 551 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 TAS2R41P59536 307 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 ZNF92Q03936 586 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 TRAP1Q12931 704 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 DYNC1I2Q13409 638 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 RSPO1Q2MKA7 263 aaPredicted RBP8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 SLC2A7Q6PXP3 512 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 CORO6Q6QEF8 472 aa8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 ZNF782Q6ZMW2 699 aaPredicted RBP8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 TSEN54Q7Z6J9 526 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 TSPYL5Q86VY4 417 aaPredicted RBP8.72□□□□□ -1.01
PTP4A1-207ENST00000639568 ZNRF1Q8ND25 227 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms