RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CNR1P21554 472 aa12.86□□□□□ -0.35
SCARB2-208ENST00000638372 PSMB6P28072 239 aa12.86□□□□□ -0.35
SCARB2-208ENST00000638372 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-208ENST00000638372 OR1C1Q15619 314 aa12.86□□□□□ -0.35
SCARB2-208ENST00000638372 C1orf210Q8IVY1 113 aa12.86□□□□□ -0.35
SCARB2-208ENST00000638372 SCARB1Q8WTV0 552 aa12.86□□□□□ -0.35
SCARB2-208ENST00000638372 SPINT2O43291 252 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 CHATP28329 748 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 CSRP3P50461 194 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 EMP3P54852 163 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 HBG1P69891 147 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 HBG2P69892 147 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 TIGD3Q6B0B8 471 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 OR8G2PQ6IF36 304 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 HEYLQ9NQ87 328 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-208ENST00000638372 CLEC1BQ9P126 229 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 TEX51A0A1B0GUA7 166 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 SLC22A20A6NK97 555 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 XRCC2O43543 280 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 WNT11O96014 354 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 ZNF85Q03923 595 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 UPRTQ96BW1 309 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 PLEKHF2Q9H8W4 249 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 SDHAF2Q9NX18 166 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 FBXO4Q9UKT5 387 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 OR6C65A6NJZ3 312 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 PLPP3O14495 311 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 ECI1P42126 302 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 SPEM2Q0P670 501 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 B3GNTL1Q67FW5 361 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-208ENST00000638372 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 OR5M9Q8NGP3 310 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 RAB39BQ96DA2 213 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 MEIKINA0A087WXM9 373 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 TOR1AO14656 332 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
SCARB2-208ENST00000638372 AVPR2P30518 371 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 ARR3P36575 388 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 FUT7Q11130 342 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 EIF2S3LQ2VIR3 472 aaKnown RBP12.85□□□□□ -0.35
SCARB2-208ENST00000638372 CDONQ4KMG0 1287 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 ZNF808Q8N4W9 903 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-208ENST00000638372 ZNF680Q8NEM1 530 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 MCHR2Q969V1 340 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 INTS12Q96CB8 462 aaKnown RBP12.85□□□□□ -0.35
SCARB2-208ENST00000638372 RASL10BQ96S79 203 aa12.85□□□□□ -0.35
SCARB2-208ENST00000638372 CDX2Q99626 313 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-208ENST00000638372 ANKRD34BA5PLL1 514 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 RAB1AP62820 205 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 LHFPL2Q6ZUX7 228 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 ATG4DQ86TL0 474 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 GCNT2Q8N0V5 402 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 KCNRGQ8N5I3 272 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 LSMEM1Q8N8F7 131 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 PTPMT1Q8WUK0 201 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 PPP1R1CQ8WVI7 109 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 C10orf90Q96M02 699 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 ZPBPQ9BS86 351 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 MRM2Q9UI43 246 aaKnown RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 GCM2O75603 506 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 KITLGP21583 273 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 ZNF266Q14584 549 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 PRSS53Q2L4Q9 553 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 SOHLH1Q5JUK2 328 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 NPEPL1Q8NDH3 523 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 ST8SIA4Q92187 359 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 POLDIP2Q9Y2S7 368 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 RPS10-NUDT3A0A1W2PQS6 291 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 CRYAAP02489 173 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 NDUFB7P17568 137 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 RPS10P46783 165 aaKnown RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 NOVA1P51513 510 aaKnown RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 PP6455Q8WZ26 134 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 PFDN5Q99471 154 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 EXOSC3Q9NQT5 275 aaKnown RBP12.84□□□□□ -0.35
SCARB2-208ENST00000638372 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
SCARB2-208ENST00000638372 TRIM64BA6NI03 449 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 MT-CO3P00414 261 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 TAS2R30P59541 319 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.35
SCARB2-208ENST00000638372 DGAT2L6Q6ZPD8 337 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 OR4A16Q8NH70 328 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 OR1F12Q8NHA8 337 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 TCTEX1D2Q8WW35 142 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 WFDC6Q9BQY6 131 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 TAF9BQ9HBM6 251 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 SLC39A9Q9NUM3 307 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 PPP1R3CQ9UQK1 317 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 PRELID3BQ9Y3B1 194 aa12.83□□□□□ -0.35
SCARB2-208ENST00000638372 H7C1Q1 480 aa12.83□□□□□ -0.36
SCARB2-208ENST00000638372 DMKNQ6E0U4 476 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-208ENST00000638372 ZNF573Q86YE8 665 aa12.83□□□□□ -0.36
SCARB2-208ENST00000638372 C20orf196Q8IYI0 205 aa12.83□□□□□ -0.36
SCARB2-208ENST00000638372 SLC22A18ASQ8N1D0 253 aa12.83□□□□□ -0.36
SCARB2-208ENST00000638372 D2HGDHQ8N465 521 aa12.83□□□□□ -0.36
SCARB2-208ENST00000638372 RTN4IP1Q8WWV3 396 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms