RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 OR8B8Q15620 311 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 FBXL19-AS1Q494R0 122 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 GLT8D1Q68CQ7 371 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 ASPHD2Q6ICH7 369 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 UNQ6126/PRO20091Q6UXV3 157 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 UTS2BQ765I0 119 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 MYPOPQ86VE0 399 aaPredicted RBP10.17□□□□□ -0.78
CLN6-223ENST00000637823 FJX1Q86VR8 437 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 CDH26Q8IXH8 852 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 C1orf174Q8IYL3 243 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 FOXRED1Q96CU9 486 aaPredicted RBP10.17□□□□□ -0.78
CLN6-223ENST00000637823 MRI1Q9BV20 369 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 TMEM138Q9NPI0 162 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 TUBG2Q9NRH3 451 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 ABRACLQ9P1F3 81 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 ERRFI1Q9UJM3 462 aaPredicted RBP10.17□□□□□ -0.78
CLN6-223ENST00000637823 CMAHPQ9Y471 501 aa10.17□□□□□ -0.78
CLN6-223ENST00000637823 NBASA2RRP1 2371 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 IGHV1-18A0A0C4DH31 117 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 A6NIN4 97 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 RGS5O15539 181 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 ALDOBP05062 364 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 CECR9P0C854 216 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 SLC2A2P11168 524 aaPredicted RBP10.16□□□□□ -0.78
CLN6-223ENST00000637823 FAHP16930 419 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 ATF1P18846 271 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 CFPP27918 469 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 THBS2P35442 1172 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 RAD52P43351 418 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 ZNF83P51522 516 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 UCP2P55851 309 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 ADORA2A-AS1P86434 159 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 SPOCK1Q08629 439 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 TNK1Q13470 666 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 GK2Q14410 553 aaPredicted RBP10.16□□□□□ -0.78
CLN6-223ENST00000637823 TAB1Q15750 504 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 MRPL21Q7Z2W9 205 aaKnown RBP10.16□□□□□ -0.78
CLN6-223ENST00000637823 ZNF101Q8IZC7 436 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 NKAIN3Q8N8D7 197 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 LRRC46Q96FV0 321 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 CXorf56Q9H5V9 222 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 PTTG3PQ9NZH4 202 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 COMMD3Q9UBI1 195 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 HCFC1P51610 2035 aa10.16□□□□□ -0.78
CLN6-223ENST00000637823 SPENQ96T58 3664 aaKnown RBP10.15□□□□□ -0.78
CLN6-223ENST00000637823 IGHV2OR16-5A0A0B4J2B6 119 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 GGT3PA6NGU5 568 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 SLC17A2O00624 439 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 MAGEB3O15480 346 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 SULT1B1O43704 296 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 INHBBP09529 407 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 CALCBP10092 127 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 ACKR3P25106 362 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 TNFSF8P32971 234 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 RANBP1P43487 201 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 PPP1CBP62140 327 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 C4orf17Q53FE4 359 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 C1orf100Q5SVJ3 147 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 CLVS2Q5SYC1 327 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 HES5Q5TA89 166 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 DDI2Q5TDH0 399 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 RFPL4BQ6ZWI9 263 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 KRT74Q7RTS7 529 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 OR5AS1Q8N127 324 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 DNAAF1Q8NEP3 725 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 CSNK2A3Q8NEV1 391 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 OR51A2Q8NGJ7 313 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 OR13C9Q8NGT0 318 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 PRR7Q8TB68 274 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 PIGTQ969N2 578 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 CCDC120Q96HB5 630 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 CEP19Q96LK0 163 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 WDFY2Q96P53 400 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 CHST5Q9GZS9 411 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 POFUT1Q9H488 388 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 PLGRKTQ9HBL7 147 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 NEK6Q9HC98 313 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 HMG20AQ9NP66 347 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 ABCB9Q9NP78 766 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 STEAP1Q9UHE8 339 aa10.15□□□□□ -0.78
CLN6-223ENST00000637823 ZNF816-ZNF321PA0A0X1KG74 233 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 CLDN25C9JDP6 229 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 M0R1B8 84 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 KALRNO60229 2985 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 GMDSO60547 372 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 SMPD2O60906 423 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 NRASP01111 189 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 PRF1P14222 555 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 GNLYP22749 145 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 CCKARP32238 428 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 ETV6P41212 452 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 CAPZA1P52907 286 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 SCAND1P57086 179 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 NAAAQ02083 359 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 TLE1Q04724 770 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 HLXQ14774 488 aaPredicted RBP10.14□□□□□ -0.79
CLN6-223ENST00000637823 UBE2V2Q15819 145 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 RAB11BQ15907 218 aa10.14□□□□□ -0.79
CLN6-223ENST00000637823 TMEM42Q69YG0 159 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms