RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DDOSTP39656 456 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 GTF2A1P52655 376 aaPredicted RBP13.65□□□□□ -0.22
CLN6-216ENST00000636876 TNK1Q13470 666 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 OR8B8Q15620 311 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 ODF4Q2M2E3 257 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 KCTD21Q4G0X4 260 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 CCDC58Q4VC31 144 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 XAF1Q6GPH4 301 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 RPL22L1Q6P5R6 122 aaKnown RBP13.65□□□□□ -0.22
CLN6-216ENST00000636876 PLPP7Q8NBV4 271 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 BHLHE23Q8NDY6 225 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 OR8G5Q8NG78 346 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 RPS4Y2Q8TD47 263 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 NINJ1Q92982 152 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 ITFG2Q969R8 447 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 MBD6Q96DN6 1003 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 FAM71F1Q96KD3 344 aaPredicted RBP13.65□□□□□ -0.22
CLN6-216ENST00000636876 MS4A5Q9H3V2 200 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 TRIM36Q9NQ86 728 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 ZNF701Q9NV72 531 aaPredicted RBP13.65□□□□□ -0.22
CLN6-216ENST00000636876 TRBV2A0A0J9YWF9 115 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 A0A1B0GVI7 797 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 LOC107986453A0A1B0GWG9 222 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 TRIM64A6NGJ6 449 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 ZSCAN5BA6NJL1 495 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 OGG1O15527 345 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 NAT2P11245 290 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 CCL1P22362 96 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 ACKR3P25106 362 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 MAP2K3P46734 347 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 ZNF81P51508 661 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 CHN2P52757 468 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 CDH15P55291 814 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 DOC2BQ14184 412 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 CDK5R1Q15078 307 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 ZMAT1Q5H9K5 638 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 TMEM244Q5VVB8 128 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 Q6ZR03 302 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 Q6ZSR3 168 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 DOK3Q7L591 496 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 ZCCHC24Q8N2G6 241 aaKnown RBP13.64□□□□□ -0.23
CLN6-216ENST00000636876 ZNF676Q8N7Q3 588 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 CSNK2A3Q8NEV1 391 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 OR5M11Q96RB7 305 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 VRK1Q99986 396 aaPredicted RBP13.64□□□□□ -0.23
CLN6-216ENST00000636876 SLC30A2Q9BRI3 323 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 MSL2Q9HCI7 577 aa13.64□□□□□ -0.23
CLN6-216ENST00000636876 BEX4Q9NWD9 120 aaPredicted RBP13.64□□□□□ -0.23
CLN6-216ENST00000636876 SIRT4Q9Y6E7 314 aaPredicted RBP13.64□□□□□ -0.23
CLN6-216ENST00000636876 A0A1B0GWJ7 208 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 TMEM212A6NML5 194 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 C17orf100A8MU93 164 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 MTRF1O75570 445 aaKnown RBP13.63□□□□□ -0.23
CLN6-216ENST00000636876 DHRS3O75911 302 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 ISG15P05161 165 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 PAX1P15863 534 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 MAP2K4P45985 399 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 TAS2R43P59537 309 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 BDH1Q02338 343 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 SPHARQ15513 63 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 TBCEQ15813 527 aaPredicted RBP13.63□□□□□ -0.23
CLN6-216ENST00000636876 DMKNQ6E0U4 476 aaPredicted RBP13.63□□□□□ -0.23
CLN6-216ENST00000636876 ZNF773Q6PK81 442 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 RDH10Q8IZV5 341 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 CCDC54Q8NEL0 328 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 OR13G1Q8NGZ3 307 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 TPK1Q9H3S4 243 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 TMEM100Q9NV29 134 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 MRPL15Q9P015 296 aaKnown RBP13.63□□□□□ -0.23
CLN6-216ENST00000636876 ZDHHC8Q9ULC8 765 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 V9GYS6 101 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 CSMD2Q7Z408 3487 aa13.63□□□□□ -0.23
CLN6-216ENST00000636876 AKAP9Q99996 3911 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 DHRS7CA6NNS2 312 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 SYT7O43581 403 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 ZFPL1O95159 310 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 TNFAIP8O95379 198 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 ADH4P08319 380 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 ACHEP22303 614 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 PTH2RP49190 550 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 ACSM1Q08AH1 577 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 MED22Q15528 200 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 DEFB113Q30KQ7 82 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 PCGF3Q3KNV8 242 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 SVOPQ8N4V2 548 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 ZFP41Q8N8Y5 198 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 SEMA6DQ8NFY4 1073 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 OR14K1Q8NGZ2 314 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 OR5AK2Q8NH90 309 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 SMIM19Q96E16 107 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 TRMT61AQ96FX7 289 aaKnown RBP13.62□□□□□ -0.23
CLN6-216ENST00000636876 SORCS2Q96PQ0 1159 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 DIRC2Q96SL1 478 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 PDCD1LG2Q9BQ51 273 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 GSX2Q9BZM3 304 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 COMMD4Q9H0A8 199 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 RAB1BQ9H0U4 201 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 NKIRAS2Q9NYR9 191 aa13.62□□□□□ -0.23
CLN6-216ENST00000636876 HHLA2Q9UM44 414 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms