RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 CA6P23280 308 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 ANOS1P23352 680 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 HTR1FP30939 366 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 CXCR4P61073 352 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 FAM3AP98173 230 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
LINC00339-209ENST00000635450 MZT1Q08AG7 82 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 SNCBQ16143 134 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
LINC00339-209ENST00000635450 PRSS45Q7RTY3 260 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 OR51F2Q8NH61 342 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 OR8B4Q96RC9 309 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 GAL3ST1Q99999 423 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 ADAT1Q9BUB4 502 aaKnown RBP13.11□□□□□ -0.31
LINC00339-209ENST00000635450 TTTY10Q9BZA0 68 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 CLN6Q9NWW5 311 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 COPS3Q9UNS2 423 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 GMPPBQ9Y5P6 360 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 TMEM269A0A1B0GVZ9 245 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 A0A1B0GWJ7 208 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 ACOD1A6NK06 481 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 LRRC30A6NM36 301 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 SNTNA6NMZ2 147 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 PLPP2O43688 288 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 VENTXO95231 258 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 IRF2P14316 349 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 ANPEPP15144 967 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 DCTDP32321 178 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 ROM1Q03395 351 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-209ENST00000635450 MOGAT3Q86VF5 341 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 KLBQ86Z14 1044 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 C1orf87Q8N0U7 546 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 FTMTQ8N4E7 242 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 RFLNBQ8N5W9 214 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 CELF2-AS1Q8N7Q2 184 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-209ENST00000635450 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 CSNK2A3Q8NEV1 391 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 SEMA6DQ8NFY4 1073 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 SLC29A1Q99808 456 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF319Q9P2F9 582 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF391Q9UJN7 358 aa13.1□□□□□ -0.31
LINC00339-209ENST00000635450 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.1□□□□□ -0.31
LINC00339-209ENST00000635450 IGHV3-64DA0A0J9YX35 117 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 TCF21O43680 179 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 OR2T7P0C7T2 308 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 ADRA2CP18825 462 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 CD200P41217 278 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 GSK3AP49840 483 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 MMP16P51512 607 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 EGR3Q06889 387 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 FAHD2BQ6P2I3 314 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-209ENST00000635450 OR8B12Q8NGG6 310 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 OR11L1Q8NGX0 322 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 OR2T27Q8NH04 317 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 OR8S1Q8NH09 359 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF420Q8TAQ5 688 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-209ENST00000635450 ERGIC1Q969X5 290 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 FAHD2AQ96GK7 314 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 TBX5Q99593 518 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 TMPRSS13Q9BYE2 586 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 PCDHB10Q9UN67 800 aa13.09□□□□□ -0.31
LINC00339-209ENST00000635450 TRAV20A0A0B4J274 112 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 LOC100130705A0A1B0GUX0 176 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 hCG_38984A0A1B0GV85 526 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 TMEM178BH3BS89 294 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 MPZL2O60487 215 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 PNPP00491 289 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 IGHV2-70P01814 119 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 KRT8P05787 483 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 PCMT1P22061 227 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 GNALP38405 381 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 GATA4P43694 442 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 SNRPGP62308 76 aaKnown RBP13.08□□□□□ -0.32
LINC00339-209ENST00000635450 BTG1P62324 171 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 MAB21L1Q13394 359 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 ZNF181Q2M3W8 571 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 COMMD2Q86X83 199 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 KLHL36Q8N4N3 616 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 SPICQ8N5J4 248 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 OR10H4Q8NGA5 316 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 UBE2FQ969M7 185 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 MBOAT4Q96T53 435 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 APOL4Q9BPW4 351 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 OCEL1Q9H607 264 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 C14orf119Q9NWQ9 140 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 GTF2A1LQ9UNN4 478 aa13.08□□□□□ -0.32
LINC00339-209ENST00000635450 A0A0U1RQV5 110 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 ANKRD65E5RJM6 399 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 LOC110117498-PIK3R3F6TDL0 507 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 ENTPD6O75354 484 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 APOL3O95236 402 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 CYB5R3P00387 301 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-209ENST00000635450 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
LINC00339-209ENST00000635450 MTNR1AP48039 350 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms