RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CNIH2Q6PI25 160 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 PLET1Q6UQ28 207 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 SEZ6L2Q6UXD5 910 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 MEX3BQ6ZN04 569 aaKnown RBP12.52□□□□□ -0.41
LINC00339-208ENST00000634934 NOXA1Q86UR1 476 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 LRRC28Q86X40 367 aaPredicted RBP12.52□□□□□ -0.41
LINC00339-208ENST00000634934 Q8N402 240 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 ENKURQ8TC29 256 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 SPTSSAQ969W0 71 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 CREB3L1Q96BA8 519 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 C4orf36Q96KX1 117 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 CMTM3Q96MX0 182 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 ISG20L2Q9H9L3 353 aaKnown RBP12.52□□□□□ -0.41
LINC00339-208ENST00000634934 CDH20Q9HBT6 801 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 TRIM36Q9NQ86 728 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 CYSLTR2Q9NS75 346 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 CRIM1Q9NZV1 1036 aa12.52□□□□□ -0.41
LINC00339-208ENST00000634934 ZNF254O75437 659 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 SC5DO75845 299 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 LALBAP00709 142 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 TACSTD2P09758 323 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 SLC6A9P48067 706 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 CDONQ4KMG0 1287 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 PAMR1Q6UXH9 720 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 TMEM91Q6ZNR0 172 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 RHOUQ7L0Q8 258 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 DMRTC2Q8IXT2 367 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-208ENST00000634934 C19orf18Q8NEA5 215 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 OR1J2Q8NGS2 313 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 CAPSLQ8WWF8 208 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 POM121L2Q96KW2 1035 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 TPK1Q9H3S4 243 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 CELSR2Q9HCU4 2923 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 BRD7Q9NPI1 651 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 ACOXLQ9NUZ1 547 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 ATPIF1Q9UII2 106 aa12.51□□□□□ -0.41
LINC00339-208ENST00000634934 M0R135 149 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 MT-ND5P03915 603 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 EPXP11678 715 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 CRYGSP22914 178 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 CD40P25942 277 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 CX3CR1P49238 355 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 MXD1Q05195 221 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 TNK1Q13470 666 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-208ENST00000634934 C3orf36Q3SXR2 165 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 YIF1BQ5BJH7 314 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 LIPNQ5VXI9 398 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 TMEM108Q6UXF1 575 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 KCTD20Q7Z5Y7 419 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 PAQR4Q8N4S7 273 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-208ENST00000634934 MS4A15Q8N5U1 240 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-208ENST00000634934 PHYHIPQ92561 330 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 TRIM63Q969Q1 353 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 ZNF799Q96GE5 643 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 ZCCHC4Q9H5U6 513 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 GTF2A1LQ9UNN4 478 aa12.5□□□□□ -0.41
LINC00339-208ENST00000634934 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
LINC00339-208ENST00000634934 DPRXA6NFQ7 191 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 LYRM1O43325 122 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 ORC5O43913 435 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 ABHD16AO95870 558 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 CRYAAP02489 173 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 C1QBP02746 253 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 ANXA2P07355 339 aaKnown RBP12.49□□□□□ -0.41
LINC00339-208ENST00000634934 ACSM4P0C7M7 580 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 SLC2A1P11166 492 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 IGFBP2P18065 325 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 CELP19835 753 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 PTAFRP25105 342 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 PSMB10P40306 273 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 NAAAQ02083 359 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 BSPH1Q075Z2 132 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 BAIAP2L2Q6UXY1 529 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 SYS1Q8N2H4 156 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 FAM222BQ8WU58 562 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 TMEM203Q969S6 136 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 PLPPR2Q96GM1 343 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 RADILQ96JH8 1075 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
LINC00339-208ENST00000634934 TMEM165Q9HC07 324 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 PTTG3PQ9NZH4 202 aa12.49□□□□□ -0.41
LINC00339-208ENST00000634934 TRAV1-2A0A0B4J238 106 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 A0A0B4J293 547 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 IGHV2OR16-5A0A0B4J2B6 119 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 TMEM269A0A1B0GVZ9 245 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 APOC1P02654 83 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 LCATP04180 440 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 AZGP1P25311 298 aaKnown RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 CALCRP30988 508 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 GBX2P52951 348 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 RAG2P55895 527 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 ZNF121P58317 390 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 HGFACQ04756 655 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms