RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GOLGA8OA6NCC3 632 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 METTL21EPA6NDL7 271 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 OR6C65A6NJZ3 312 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 E5RI56 91 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 GOLGA8NF8WBI6 632 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 G3V3Y1 287 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 GOLGA8RI6L899 631 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 WWP2O00308 870 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CDC7O00311 574 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PLPP1O14494 284 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 DNALI1O14645 258 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PFDN6O15212 129 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ERI3O43414 337 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 EFNA2O43921 213 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TPST2O60704 377 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SCGNO76038 276 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 RCBTB2O95199 551 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PSMG1O95456 288 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TTC4O95801 387 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 AIFM1O95831 613 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 LY6G6DO95868 133 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 RENP00797 406 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 MELTFP08582 738 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 H2BFMP0C1H6 154 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CT62P0C5K7 136 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 RHOXF2BP0C7M4 288 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 C1GALT1C1LP0DN25 315 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 DBTP11182 482 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF708P17019 499 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PGAM1P18669 254 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 HIST1H1TP22492 207 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CRYGSP22914 178 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 LAP3P28838 519 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ANP32AP39687 249 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 LHX2P50458 406 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CDK9P50750 372 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CLDN18P56856 261 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TAS2R39P59534 338 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 RND3P61587 244 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 STXBP1P61764 594 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PAX8Q06710 450 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 DDX39BQ13838 428 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CYLC2Q14093 348 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SERTAD2Q14140 314 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TGFBIQ15582 683 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 OR4D1Q15615 310 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TSNQ15631 228 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CYP51A1Q16850 503 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 MICAQ29983 383 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TMEM44Q2T9K0 475 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 C18orf21Q32NC0 220 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CNPY1Q3B7I2 92 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SNAI3Q3KNW1 292 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 GGTA1PQ4G0N0 100 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 GLIPR1L2Q4G1C9 344 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SPANXN3Q5MJ09 141 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM120AOSQ5T036 256 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PVRIGQ6DKI7 326 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 OR8G2PQ6IF36 304 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM45BPQ6NSW5 357 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ACSM5Q6NUN0 579 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 FAHD2BQ6P2I3 314 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 OPN5Q6U736 354 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TMIGD1Q6UXZ0 262 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PRSS48Q7RTY5 328 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 C16orf62Q7Z3J2 963 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 THOC6Q86W42 341 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC38A6Q8IZM9 456 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ST13P4Q8IZP2 240 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TMEM156Q8N614 296 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ACOT4Q8N9L9 421 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 OR10A7Q8NGE5 316 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 OR4D5Q8NGN0 318 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 RFESDQ8TAC1 157 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CNIH3Q8TBE1 160 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM45AQ8TCE6 357 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ZPLD1Q8TCW7 415 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 AENQ8WTP8 325 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 HGDQ93099 445 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TUBGCP3Q96CW5 907 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CERS2Q96G23 380 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 FAHD2AQ96GK7 314 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CAPZA3Q96KX2 299 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 RILPQ96NA2 401 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ZFP3Q96NJ6 502 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 GPR22Q99680 433 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC6A7Q99884 636 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 MAPKAP1Q9BPZ7 522 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 AIF1LQ9BQI0 150 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC39A3Q9BRY0 314 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 NAT9Q9BTE0 207 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TMEM43Q9BTV4 400 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SFXN3Q9BWM7 321 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 HCAR1Q9BXC0 346 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CAPS2Q9BXY5 557 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 UGT2B28Q9BY64 529 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ANGPTL4Q9BY76 406 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 TSGA10Q9BZW7 698 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 DERL2Q9GZP9 239 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 DEFB127Q9H1M4 99 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms