RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RAB40BQ12829 278 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 TAF10Q12962 218 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 GTF2H2Q13888 395 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 FAM53BQ14153 422 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 TRIP13Q15645 432 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 TEDDM1Q5T9Z0 273 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 CPTPQ5TA50 214 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 SP5Q6BEB4 398 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 GTF2H2CQ6P1K8 395 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 WDR74Q6RFH5 385 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 TMEM205Q6UW68 189 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 PARM1Q6UWI2 310 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 ATG4DQ86TL0 474 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 LGI4Q8N135 537 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 B3GALNT2Q8NCR0 500 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 ZPLD1Q8TCW7 415 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 RGP1Q92546 391 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 DYRK2Q92630 601 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 DLX4Q92988 240 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 IMP4Q96G21 291 aaKnown RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 RBP7Q96R05 134 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 P2RX4Q99571 388 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 ZNF670Q9BS34 389 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 ACOT13Q9NPJ3 140 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 RASL12Q9NYN1 266 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 GPR160Q9UJ42 338 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 SLX4Q8IY92 1834 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 MRC1P22897 1456 aa4.16□□□□□ -1.74
SDCBP-213ENST00000630925 MYH14Q7Z406 1995 aaKnown RBP4.16□□□□□ -1.74
SDCBP-213ENST00000630925 A0A0G2JK05 382 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TRBV4-1A0A0J9YWV2 114 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 ZCWPW2A0A1B0GU75 182 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TCRBV9S1A1TA0A576 114 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 MED19A0JLT2 244 aaPredicted RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TRDCB7Z8K6 153 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 PLIN3O60664 434 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 ZNF623O75123 536 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 CNMDO75829 334 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 PLAUP00749 431 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 MBL2P11226 248 aaPredicted RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 H2AFXP16104 143 aaPredicted RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 GPX2P18283 190 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 ADORA2BP29275 332 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 SDC4P31431 198 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 CEACAM8P31997 349 aaPredicted RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 IFNGR2P38484 337 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 ZFP36L2P47974 494 aaKnown RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 HCCSP53701 268 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 DLX6P56179 175 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 RPS14P62263 151 aaKnown RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 OPCMLQ14982 345 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TTLL9Q3SXZ7 439 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TIGITQ495A1 244 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TMEM97Q5BJF2 176 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 KCTD18Q6PI47 426 aaPredicted RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 Q6ZNX1 250 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 RAB43Q86YS6 212 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 CADM2Q8N3J6 435 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 DUSP18Q8NEJ0 188 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 OR10G9Q8NGN4 311 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 SLC7A13Q8TCU3 470 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 MAPK15Q8TD08 544 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 AENQ8WTP8 325 aaKnown RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 HPSE2Q8WWQ2 592 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TMEM18Q96B42 140 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 ZNF681Q96N22 645 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 MS4A8Q9BY19 250 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 CWH43Q9H720 699 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 TPSG1Q9NRR2 321 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 ASIC5Q9NY37 505 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 Q9UF83 564 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 COPS3Q9UNS2 423 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 KCNIP3Q9Y2W7 256 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 SIGLEC9Q9Y336 463 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 EXOSC1Q9Y3B2 195 aaKnown RBP4.15□□□□□ -1.74
SDCBP-213ENST00000630925 WIPI2Q9Y4P8 454 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 RGPD2P0DJD1 1756 aa4.15□□□□□ -1.74
SDCBP-213ENST00000630925 CD163L1Q9NR16 1453 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 LRIT2A6NDA9 550 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 FAM25AB3EWG3 89 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 FAM25CB3EWG5 89 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 FAM25GB3EWG6 89 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 GFYI3L273 518 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 SLC22A5O76082 557 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 CD8AP01732 235 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 HOXC4P09017 264 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-213ENST00000630925 GP1BBP13224 206 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 CYBAP13498 195 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 EDNRAP25101 427 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 RPL12P30050 165 aaKnown RBP4.15□□□□□ -1.75
SDCBP-213ENST00000630925 CDH11P55287 796 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 CDH12P55289 794 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 RIPPLY1Q0D2K3 151 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 UNC119Q13432 240 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 TFDP2Q14188 446 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 EDDM3AQ14507 147 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 SURF2Q15527 256 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-213ENST00000630925 TRAM1Q15629 374 aa4.15□□□□□ -1.75
SDCBP-213ENST00000630925 LRRC37A5PQ49AS3 106 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms