RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 FN3KQ9H479 309 aa12□□□□□ -0.49
PNKP-218ENST00000625299 RPRD1BQ9NQG5 326 aaKnown RBP12□□□□□ -0.49
PNKP-218ENST00000625299 GMPR2Q9P2T1 348 aaKnown RBP12□□□□□ -0.49
PNKP-218ENST00000625299 CYB5R1Q9UHQ9 305 aa12□□□□□ -0.49
PNKP-218ENST00000625299 PRPF19Q9UMS4 504 aaKnown RBP12□□□□□ -0.49
PNKP-218ENST00000625299 UNC119BA6NIH7 251 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 TXNDC12O95881 172 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 SELLP14151 372 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
PNKP-218ENST00000625299 GRK5P34947 590 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 RPS27P42677 84 aaKnown RBP11.99□□□□□ -0.49
PNKP-218ENST00000625299 CSNK2BP67870 215 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 LRRC10Q5BKY1 277 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 AGBL2Q5U5Z8 902 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 C11orf87Q6NUJ2 197 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 BEND2Q8NDZ0 799 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 OR5T2Q8NGG2 359 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 OR4K13Q8NH42 304 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 MAP6Q96JE9 813 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 NKX3-1Q99801 234 aaPredicted RBP11.99□□□□□ -0.49
PNKP-218ENST00000625299 DCTN5Q9BTE1 182 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 MAB21L2Q9Y586 359 aa11.99□□□□□ -0.49
PNKP-218ENST00000625299 A0A1W2PQ09 198 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 FBXO24O75426 580 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 H1F0P07305 194 aaKnown RBP11.98□□□□□ -0.49
PNKP-218ENST00000625299 SLC2A1P11166 492 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 PAX6P26367 422 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 UBE2E1P51965 193 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 COQ5Q5HYK3 327 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 NCR3LG1Q68D85 454 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 SMARCD3Q6STE5 483 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 DPY19L4Q7Z388 723 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 WDR86Q86TI4 376 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 FANK1Q8TC84 345 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 TNFRSF14Q92956 283 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 ANKRD19PQ9H560 264 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 RNPEPL1Q9HAU8 725 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 SNTG1Q9NSN8 517 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 GID8Q9NWU2 228 aa11.98□□□□□ -0.49
PNKP-218ENST00000625299 LOC100653049A0A140TA62 436 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 NKX6-3A6NJ46 265 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 ANKRD30BLA7E2S9 258 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 BBIP1A8MTZ0 92 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 CXCR6O00574 342 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 GSTA4O15217 222 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 KRT34O76011 436 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 SERPINA1P01009 418 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 NPPAP01160 153 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 TFF1P04155 84 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 CD28P10747 220 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 HIST1H1CP16403 213 aaKnown RBP11.97□□□□□ -0.49
PNKP-218ENST00000625299 ZNF823P16415 610 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 POU1F1P28069 291 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 OMPP47874 163 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 ACSM1Q08AH1 577 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 LRRC75BQ2VPJ9 315 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 FOXB2Q5VYV0 432 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 PGBD2Q6P3X8 592 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 C11orf53Q8IXP5 236 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 SDR9C7Q8NEX9 313 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 OR1M1Q8NGA1 313 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 OR9Q1Q8NGQ5 310 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 COPS4Q9BT78 406 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 NPFFR1Q9GZQ6 430 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 RANBP3Q9H6Z4 567 aaPredicted RBP11.97□□□□□ -0.49
PNKP-218ENST00000625299 RAB18Q9NP72 206 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 KRCC1Q9NPI7 259 aaPredicted RBP11.97□□□□□ -0.49
PNKP-218ENST00000625299 INTS9Q9NV88 658 aaKnown RBP11.97□□□□□ -0.49
PNKP-218ENST00000625299 MRPL22Q9NWU5 206 aaKnown RBP11.97□□□□□ -0.49
PNKP-218ENST00000625299 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
PNKP-218ENST00000625299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.96□□□□□ -0.49
PNKP-218ENST00000625299 TBX1O43435 398 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 ANGPTL7O43827 346 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 NDUFB7P17568 137 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 NOS3P29474 1203 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 PRKXP51817 358 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 EMX1Q04741 257 aaPredicted RBP11.96□□□□□ -0.49
PNKP-218ENST00000625299 SF3A3Q12874 501 aaKnown RBP eCLIP11.96□□□□□ -0.49
PNKP-218ENST00000625299 BLMHQ13867 455 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 METTL21CQ5VZV1 264 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 DRAM2Q6UX65 266 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 WDR82Q6UXN9 313 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 CBLL1Q75N03 491 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 OR4F17Q8NGA8 305 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 OR52J3Q8NH60 311 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 C8orf46Q8TAG6 207 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 DMRTB1Q96MA1 342 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 OR4F4Q96R69 305 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 IFT27Q9BW83 186 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 METTL8Q9H825 291 aaKnown RBP11.96□□□□□ -0.49
PNKP-218ENST00000625299 ZNF391Q9UJN7 358 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 FAM32AQ9Y421 112 aaKnown RBP11.96□□□□□ -0.49
PNKP-218ENST00000625299 ENPP4Q9Y6X5 453 aa11.96□□□□□ -0.49
PNKP-218ENST00000625299 TRBV4-1A0A0J9YWV2 114 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 A0A1W2PRQ8 180 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 OR6C68A6NDL8 312 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 TVP23AA6NH52 213 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 H0YAE9 185 aa11.95□□□□□ -0.5
PNKP-218ENST00000625299 CDIPTO14735 213 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms