RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PCMT1P22061 227 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 GBX2P52951 348 aaPredicted RBP11.63□□□□□ -0.55
NEK3-210ENST00000620675 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 MED22Q15528 200 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 NKPD1Q17RQ9 610 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 RPS4Y2Q8TD47 263 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 COG8Q96MW5 612 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 MOB1AQ9H8S9 216 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 FAIMQ9NVQ4 179 aa11.63□□□□□ -0.55
NEK3-210ENST00000620675 ACANP16112 2415 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 TRBV2A0A0J9YWF9 115 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 GGT3PA6NGU5 568 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 ACOD1A6NK06 481 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 MLNRO43193 412 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 SELEP16581 610 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 SLC3A1Q07837 685 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 OR8B8Q15620 311 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 OR10AD1Q8NGE0 317 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 MRPL48Q96GC5 212 aaKnown RBP11.62□□□□□ -0.55
NEK3-210ENST00000620675 MND1Q9BWT6 205 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 YTHDF1Q9BYJ9 559 aaKnown RBP11.62□□□□□ -0.55
NEK3-210ENST00000620675 ACOT13Q9NPJ3 140 aa11.62□□□□□ -0.55
NEK3-210ENST00000620675 IQCF6A8MYZ5 107 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 M0R233 179 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 OGG1O15527 345 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 SPRY3O43610 288 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 NCR1O76036 304 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 FAHP16930 419 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 TGM4P49221 684 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 SNRPD2P62316 118 aaKnown RBP11.61□□□□□ -0.55
NEK3-210ENST00000620675 SPHARQ15513 63 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 KCTD21Q4G0X4 260 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 DMKNQ6E0U4 476 aaPredicted RBP11.61□□□□□ -0.55
NEK3-210ENST00000620675 OR14K1Q8NGZ2 314 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 PGLYRP3Q96LB9 341 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 SORCS2Q96PQ0 1159 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 VRK1Q99986 396 aaPredicted RBP11.61□□□□□ -0.55
NEK3-210ENST00000620675 RHBDD3Q9Y3P4 386 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 H3BSA7 217 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 RAF1P04049 648 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 HSMCR30P0CW71 290 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 CELP19835 753 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 CA6P23280 308 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 EVX1P49640 407 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 CCR9P51686 369 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 INSL4Q14641 139 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 TBCEQ15813 527 aaPredicted RBP11.61□□□□□ -0.55
NEK3-210ENST00000620675 ZNF773Q6PK81 442 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 TGIF2LYQ8IUE0 185 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 C1orf174Q8IYL3 243 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 ZNF676Q8N7Q3 588 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 PLPP7Q8NBV4 271 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 OR8G5Q8NG78 346 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 SP140LQ9H930 580 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 DYNLRB1Q9NP97 96 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 TRIM36Q9NQ86 728 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 GPR160Q9UJ42 338 aa11.61□□□□□ -0.55
NEK3-210ENST00000620675 IGHV1-46P01743 117 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 CCL1P22362 96 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 TUBG1P23258 451 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 ZNF81P51508 661 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 CCL8P80075 99 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 RPL22L1Q6P5R6 122 aaKnown RBP11.6□□□□□ -0.55
NEK3-210ENST00000620675 ORAI1Q96D31 301 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 OPALINQ96PE5 141 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 SLC30A2Q9BRI3 323 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 FGF23Q9GZV9 251 aaPredicted RBP11.6□□□□□ -0.55
NEK3-210ENST00000620675 RGCCQ9H4X1 137 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 TUBG2Q9NRH3 451 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 PIGLQ9Y2B2 252 aa11.6□□□□□ -0.55
NEK3-210ENST00000620675 ANKRD61A6NGH8 418 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 C17orf100A8MU93 164 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 VSTM5A8MXK1 200 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 SYT7O43581 403 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 DHRS3O75911 302 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 INMTO95050 263 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 TNFAIP8O95379 198 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 SELENOVP59797 346 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 RPS11P62280 158 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEK3-210ENST00000620675 TSTQ16762 297 aaKnown RBP11.59□□□□□ -0.55
NEK3-210ENST00000620675 LIPKQ5VXJ0 399 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 OR2Z1Q8NG97 314 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 OR5AK2Q8NH90 309 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 GHSRQ92847 366 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 SMIM19Q96E16 107 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 V9GYS6 101 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 F5H5P2 479 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 LYNX1G3V0Z9 82 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 HPXP02790 462 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 UBCP0CG48 685 aaKnown RBP11.59□□□□□ -0.55
NEK3-210ENST00000620675 LYNX1P0DP58 116 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 HOXA4Q00056 320 aaPredicted RBP11.59□□□□□ -0.55
NEK3-210ENST00000620675 CCDC58Q4VC31 144 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 Q6ZSR3 168 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 ADAT3Q96EY9 351 aaPredicted RBP11.59□□□□□ -0.55
NEK3-210ENST00000620675 PERPQ96FX8 193 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 ZNF696Q9H7X3 374 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 TREM2Q9NZC2 230 aa11.59□□□□□ -0.55
NEK3-210ENST00000620675 SVEP1Q4LDE5 3571 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms