RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 TRAV38-1A0A0B4J264 116 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.28■□□□□ 0.52
SRRT-218ENST00000620394 OOEPA6NGQ2 149 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 M0QZ24 198 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 NDUFA2O43678 99 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 CX3CR1P49238 355 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 BPIFB3P59826 476 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 FGF12P61328 243 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 FAM3AP98173 230 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 MZT1Q08AG7 82 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 SLC16A9Q7RTY1 509 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 GCSAMQ8N6F7 178 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 OR4F5Q8NH21 305 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 INTS14Q96SY0 518 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 MMADHCQ9H3L0 296 aaPredicted RBP18.28■□□□□ 0.52
SRRT-218ENST00000620394 BEX1Q9HBH7 125 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 C14orf119Q9NWQ9 140 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 ERVK-18Q9QC07 812 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 SOX21Q9Y651 276 aaPredicted RBP18.28■□□□□ 0.52
SRRT-218ENST00000620394 CMYA5Q8N3K9 4069 aa18.28■□□□□ 0.52
SRRT-218ENST00000620394 hCG_38984A0A1B0GV85 526 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 ACOT8O14734 319 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 FAM107AO95990 144 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 LHBP01229 141 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 APOC1P02654 83 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 OPRL1P41146 370 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 EIF2B1Q14232 305 aaKnown RBP18.27■□□□□ 0.52
SRRT-218ENST00000620394 TEX36Q5VZQ5 186 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 SFRP4Q6FHJ7 346 aaPredicted RBP18.27■□□□□ 0.52
SRRT-218ENST00000620394 BRICD5Q6PL45 260 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 DPY19L4Q7Z388 723 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 ADGRG5Q8IZF4 528 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 IQCF1Q8N6M8 205 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 OR6N2Q8NGY6 317 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 GIPC3Q8TF64 312 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 CCDC124Q96CT7 223 aaKnown RBP18.27■□□□□ 0.52
SRRT-218ENST00000620394 TECTBQ96PL2 329 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 FEVQ99581 238 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 ABHD6Q9BV23 337 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 C1orf21Q9H246 121 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 SMURF1Q9HCE7 757 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 C1orf123Q9NWV4 160 aa18.27■□□□□ 0.52
SRRT-218ENST00000620394 PDP1Q9P0J1 537 aaPredicted RBP18.27■□□□□ 0.52
SRRT-218ENST00000620394 WNK1Q9H4A3 2382 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 FAM183AA6NL82 134 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 ANKRD30BLA7E2S9 258 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 C3orf80F5H4A9 247 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 GLCEO94923 617 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 LIPFP07098 398 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 MMP9P14780 707 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 GSTT1P30711 240 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 CFHR2P36980 270 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 RAG2P55895 527 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 OR8B8Q15620 311 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 C11orf91Q3C1V1 193 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 CD276Q5ZPR3 534 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 ZNF826PQ6ZT77 177 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 WDR86Q86TI4 376 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 FAM90A1Q86YD7 464 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 ERI1Q8IV48 349 aaKnown RBP18.26■□□□□ 0.51
SRRT-218ENST00000620394 TIGD4Q8IY51 512 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 CCDC197Q8NCU1 140 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 OR52H1Q8NGJ2 320 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 REEP6Q96HR9 211 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 AMELYQ99218 206 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 PKP2Q99959 881 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 CITED1Q99966 193 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 SP140LQ9H930 580 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 MED20Q9H944 212 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 KAAG1Q9UBP8 84 aa18.26■□□□□ 0.51
SRRT-218ENST00000620394 A6NLC8 198 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 ZNF879B4DU55 563 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 TIMM23O14925 209 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 HOXA3O43365 443 aaPredicted RBP18.25■□□□□ 0.51
SRRT-218ENST00000620394 TBX1O43435 398 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 ADAM20O43506 726 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 FCN3O75636 299 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 CST1P01037 141 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 ANXA2P07355 339 aaKnown RBP18.25■□□□□ 0.51
SRRT-218ENST00000620394 CFL1P23528 166 aaKnown RBP18.25■□□□□ 0.51
SRRT-218ENST00000620394 HSD11B1P28845 292 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 TIGD6Q17RP2 521 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 KLHL12Q53G59 568 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 BRD3OSQ6XYD6 125 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 SHFQ7M4L6 423 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 SGK3Q96BR1 496 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 CLPTM1LQ96KA5 538 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 LRGUKQ96M69 825 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 CHID1Q9BWS9 393 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 RNPEPL1Q9HAU8 725 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 TAS2R1Q9NYW7 299 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 ZNF281Q9Y2X9 895 aa18.25■□□□□ 0.51
SRRT-218ENST00000620394 MDFIC2A0A1B0GVS7 189 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 AQP12BA6NM10 295 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 SRRM5B3KS81 715 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 H3BN98 237 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 CRYBA1P05813 215 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 GRPP07492 148 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 HOXB6P17509 224 aaKnown RBP18.24■□□□□ 0.51
SRRT-218ENST00000620394 ZNF121P58317 390 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms