RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TRAV1-2A0A0B4J238 106 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 hCG_38984A0A1B0GV85 526 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 CLEC18AA5D8T8 446 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 TRIM64BA6NI03 449 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 H3BSH0 61 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 C19orf84I3L1E1 186 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 SLC22A1O15245 554 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 LMX1BO60663 402 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 NOL3O60936 208 aaKnown RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 DHRS3O75911 302 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 ARL6IP5O75915 188 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 CD2P06729 351 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 PLA2G2AP14555 144 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 RAC2P15153 192 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 IGFBP2P18065 325 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 SRMP19623 302 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 MAPK3P27361 379 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 DDOSTP39656 456 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 VBP1P61758 197 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 NCS1P62166 190 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 NKX6-1P78426 367 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 RELBQ01201 579 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 BSPH1Q075Z2 132 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 RIPPLY1Q0D2K3 151 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 TNK1Q13470 666 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 HLXQ14774 488 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 OR8B8Q15620 311 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 GFOD2Q3B7J2 385 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF718Q3SXZ3 478 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 HSD17B12Q53GQ0 312 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 BEX5Q5H9J7 111 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 FAM27D1Q5T7N8 215 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 ZBTB37Q5TC79 503 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 CLEC18BQ6UXF7 455 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 FBXW12Q6X9E4 464 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 PGAP1Q75T13 922 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 KRT74Q7RTS7 529 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 MRPL21Q7Z2W9 205 aaKnown RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 COMMD2Q86X83 199 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 SERPINA12Q8IW75 414 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 DMRTC2Q8IXT2 367 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 PARP16Q8N5Y8 322 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 CLEC18CQ8NCF0 446 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 SEMA6DQ8NFY4 1073 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 OR13C3Q8NGS6 347 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 SLC25A40Q8TBP6 338 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 KLF14Q8TD94 323 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 FAM222BQ8WU58 562 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 TSEN15Q8WW01 171 aaKnown RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 TMEM106AQ96A25 262 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 C12orf43Q96C57 262 aaKnown RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 PLPPR2Q96GM1 343 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 RADILQ96JH8 1075 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 KCTD7Q96MP8 289 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 OR14A2Q96R54 314 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 OR2J1Q9GZK6 312 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 OR51B6Q9H340 312 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 RNF167Q9H6Y7 350 aa6.9□□□□□ -1.3
CPNE3-209ENST00000620393 KLF2Q9Y5W3 355 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-209ENST00000620393 HIVEP3Q5T1R4 2406 aa6.9□□□□□ -1.31
CPNE3-209ENST00000620393 DIDO1Q9BTC0 2240 aaKnown RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 FAM208BQ5VWN6 2430 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ANKRD61A6NGH8 418 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 GGT3PA6NGU5 568 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 A6NIN4 97 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 CD300LBA8K4G0 201 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 VSTM5A8MXK1 200 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 DEFB108AA8MXU0 73 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ATP6V1G2-DDX39BF2Z307 99 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 H3BMQ9 156 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ABCD4O14678 606 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ALX3O95076 343 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 CD3EP07766 207 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 RNF224P0DH78 156 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ZNF250P15622 560 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 SELEP16581 610 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 IGFBP3P17936 291 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ACKR3P25106 362 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 CALRP27797 417 aaKnown RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 MTNR1BP49286 362 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 FABP6P51161 128 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ERVS71-1P61550 626 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 RPS23P62266 143 aaKnown RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 PSG7Q13046 419 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 SNTB2Q13425 540 aaKnown RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 DAZAP2Q15038 168 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 SPATA46Q5T0L3 261 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 MBNL2Q5VZF2 373 aaKnown RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 RGS7BPQ6MZT1 257 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-209ENST00000620393 SLC22A25Q6T423 547 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 USP43Q70EL4 1123 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 TPRA1Q86W33 373 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ACBD4Q8NC06 268 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 CSNK2A3Q8NEV1 391 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 NUP37Q8NFH4 326 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 OR5D14Q8NGL3 314 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 SSC4DQ8WTU2 575 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 TMEM171Q8WVE6 324 aa6.89□□□□□ -1.31
CPNE3-209ENST00000620393 ADAT3Q96EY9 351 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms