RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 OR10A2Q9H208 303 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 MOB1AQ9H8S9 216 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 ISG20L2Q9H9L3 353 aaKnown RBP12.71□□□□□ -0.37
UBXN1-218ENST00000616865 MYOZ1Q9NP98 299 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-218ENST00000616865 TBCCD1Q9NVR7 557 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 LOC390937A0A1W2PQ73 354 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 J3QW42 95 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 ADRA2AP08913 450 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 GCH1P30793 250 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 WNT4P56705 351 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 SELENOVP59797 346 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 HGFACQ04756 655 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 MED22Q15528 200 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF718Q3SXZ3 478 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 RGS7BPQ6MZT1 257 aaPredicted RBP12.7□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF773Q6PK81 442 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 RFPL4BQ6ZWI9 263 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 KLBQ86Z14 1044 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 NANOGP1Q8N7R0 232 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 PELI1Q96FA3 418 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 C1QTNF5Q9BXJ0 243 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 VCX3AQ9NNX9 186 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 TRIM36Q9NQ86 728 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 BABAM2Q9NXR7 383 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 PTTG3PQ9NZH4 202 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 STARD10Q9Y365 291 aa12.7□□□□□ -0.38
UBXN1-218ENST00000616865 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■■□□ 17.7
UBXN1-218ENST00000616865 NBEAL1Q6ZS30 2694 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 A0A087WXM4 84 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 XRCC2O43543 280 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 NGFP01138 241 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 TUBG1P23258 451 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 MMP16P51512 607 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 TAS2R43P59537 309 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 MFGE8Q08431 387 aaPredicted RBP12.69□□□□□ -0.38
UBXN1-218ENST00000616865 CARTPTQ16568 116 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 SPATA46Q5T0L3 261 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 MRPL21Q7Z2W9 205 aaKnown RBP12.69□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF101Q8IZC7 436 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 NUP37Q8NFH4 326 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 TSPAN14Q8NG11 270 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 RORBQ92753 470 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 SIGLEC11Q96RL6 698 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF649Q9BS31 505 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 BPESC1Q9GZL8 116 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 PBOV1Q9GZY1 135 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 CA10Q9NS85 328 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 FAM206AQ9NX38 181 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 CMAHPQ9Y471 501 aa12.69□□□□□ -0.38
UBXN1-218ENST00000616865 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 TGFAP01135 160 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 HSMCR30P0CW71 290 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 CFL1P23528 166 aaKnown RBP12.68□□□□□ -0.38
UBXN1-218ENST00000616865 THBS4P35443 961 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 GLRXP35754 106 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 SERPINF1P36955 418 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 MAP2K4P45985 399 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 IRF3Q14653 427 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 SPHARQ15513 63 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 SNAI3Q3KNW1 292 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 COLCA1Q6ZS62 124 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 CATSPERDQ86XM0 798 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF676Q8N7Q3 588 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 OR8B12Q8NGG6 310 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 SLC25A40Q8TBP6 338 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 VRK1Q99986 396 aaPredicted RBP12.68□□□□□ -0.38
UBXN1-218ENST00000616865 SOX7Q9BT81 388 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 OR2J1Q9GZK6 312 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 COMMD4Q9H0A8 199 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF696Q9H7X3 374 aa12.68□□□□□ -0.38
UBXN1-218ENST00000616865 NUFIP1Q9UHK0 495 aaKnown RBP12.68□□□□□ -0.38
UBXN1-218ENST00000616865 B9A039 149 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 ICMTO60725 284 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 PNPP00491 289 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 TGM4P49221 684 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 PPOXP50336 477 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
UBXN1-218ENST00000616865 EFNB3Q15768 340 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 TBCEQ15813 527 aaPredicted RBP12.67□□□□□ -0.38
UBXN1-218ENST00000616865 ODF4Q2M2E3 257 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 CR1LQ2VPA4 569 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 CCDC58Q4VC31 144 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 GLYATL3Q5SZD4 288 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 RPL22L1Q6P5R6 122 aaKnown RBP12.67□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF367Q7RTV3 350 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 SPARTQ8N0X7 666 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 OR2G2Q8NGZ5 317 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 OR2AE1Q8NHA4 323 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 SYNPRQ8TBG9 265 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 FCGR1BQ92637 280 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 REEP6Q96HR9 211 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF442Q9H7R0 627 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 DUSP13Q9UII6 198 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 FZR1Q9UM11 496 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 SLC22A13Q9Y226 551 aa12.67□□□□□ -0.38
UBXN1-218ENST00000616865 PNMA8CA0A1B0GUJ8 204 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms