RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 DEGS1O15121 323 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 KIR3DL2P43630 455 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC10A1Q14973 349 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 PLXDC2Q6UX71 529 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 TCTE3Q8IZS6 198 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 PLPP5Q8NEB5 264 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF649Q9BS31 505 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF416Q9BWM5 594 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 RPS10P5Q9NQ39 176 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 HAO2Q9NYQ3 351 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 SHISA7A6NL88 538 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 TGFBR3Q03167 851 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 OR2B11Q5JQS5 317 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 OR4D10Q8NGI6 311 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 ST6GAL2Q96JF0 529 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 FOXB1Q99853 325 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 SARGQ9BW04 601 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 TDRD6O60522 2096 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 CDC14BO60729 498 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 ASAH2BP0C7U1 165 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 SFRP5Q5T4F7 317 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 DPPA2Q7Z7J5 298 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 RBPMSQ93062 196 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 GDF15Q99988 308 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 SLCO5A1Q9H2Y9 848 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 M0R1B8 84 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 EFSO43281 561 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 GDF9O60383 454 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 ANKRD34CP0C6C1 535 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 AVPR2P30518 371 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 IDH3GP51553 393 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 AGFG1P52594 562 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 CEBPEQ15744 281 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 ACER2Q5QJU3 275 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 TMEM229BQ8NBD8 167 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 OR1F12Q8NHA8 337 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 CHAC2Q8WUX2 184 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNRF4Q8WWF5 429 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 ADIPOR1Q96A54 375 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 ZC3H10Q96K80 434 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 LOC101059948A0A1B0GTJ6 334 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 HSPB2A8KAH6 182 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 HSPB2Q16082 182 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 TIGD3Q6B0B8 471 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 MUC20Q8N307 709 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 OR11H7Q8NGC8 314 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 YIPF5Q969M3 257 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 TMEM231Q9H6L2 316 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 PLXNA4Q9HCM2 1894 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 IGKV1D-42A0A075B6H8 117 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 PLSCR5A0PG75 271 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 VAMP5O95183 116 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 ITGB2P05107 769 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 INSM1Q01101 510 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 CAMK2BQ13554 666 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 C6orf201Q7Z4U5 140 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 OR2M3Q8NG83 312 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 OR51H1Q8NH63 302 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 FLVCR1-AS1Q8TAF5 88 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 RDH5Q92781 318 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 SCPEP1Q9HB40 452 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 MRPS18AQ9NVS2 196 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC22A20A6NK97 555 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 MT-CO3P00414 261 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 CXCL3P19876 107 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 MAGEA5P43359 124 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 HES3Q5TGS1 186 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 UBALD1Q8TB05 177 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 DYRK2Q92630 601 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 PIKFYVEQ9Y2I7 2098 aa7.94□□□□□ -1.14
PDLIM5-222ENST00000615540 M0R296 226 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF205O95201 554 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 PTAFRP25105 342 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 OR8G1Q15617 311 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 OR8B8Q15620 311 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC25A26Q70HW3 274 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 LYG2Q86SG7 212 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC38A9Q8NBW4 561 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 WDR89Q96FK6 387 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC25A21Q9BQT8 299 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF275Q9NSD4 429 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 OR5H14A6NHG9 310 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 WNT11O96014 354 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 TPOP07202 933 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ACSM4P0C7M7 580 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 GALP22466 123 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 IL2RGP31785 369 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 GGTLC2Q14390 218 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 CDH26Q8IXH8 852 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZADH2Q8N4Q0 377 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 EXD3Q8N9H8 876 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ST3GAL6Q9Y274 331 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 CKAP5Q14008 2032 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ANKRD20A5PA0PJZ0 165 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 RHEBQ15382 184 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 SHEQ5VZ18 495 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 OR2AK2Q8NG84 335 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF285Q96NJ3 590 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms