RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 GAL3ST1Q99999 423 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF665Q9H7R5 613 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TMEM165Q9HC07 324 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 IKZF2Q9UKS7 526 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ANK2Q01484 3957 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 GGT3PA6NGU5 568 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 F8VVB4 439 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 F8VWA3 439 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 P2RY10O00398 339 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 CDIPTO14735 213 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 AKR7A2O43488 359 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 IGHV2-70P01814 119 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TTRP02766 147 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 GABRB1P18505 474 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 CEBPDP49716 269 aaPredicted RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 GTF2A1P52655 376 aaPredicted RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 CDH15P55291 814 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 SELENOVP59797 346 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TEX30Q5JUR7 227 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 CYB5R2Q6BCY4 276 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ARL9Q6T311 187 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 DPPA2Q7Z7J5 298 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 LHFPL3Q86UP9 236 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 BCL6BQ8N143 479 aaPredicted RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 PRSS35Q8N3Z0 413 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 OR10H4Q8NGA5 316 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 SPRYD4Q8WW59 207 aaPredicted RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ADAT1Q9BUB4 502 aaKnown RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 GABARAPL3Q9BY60 117 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 G6PC2Q9NQR9 355 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TMEM178BH3BS89 294 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 IGHV2-5P01817 119 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 OR12D2P58182 307 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ESRRGP62508 458 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF154Q13106 437 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF322Q6U7Q0 402 aaPredicted RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 KRT77Q7Z794 578 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 SLC35F2Q8IXU6 374 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 GCSAMQ8N6F7 178 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 PGAM5Q96HS1 289 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TMEM246Q9BRR3 403 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 NDEL1Q9GZM8 345 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 NIPAL2Q9H841 368 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TMEM100Q9NV29 134 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 BAIAP2Q9UQB8 552 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TMEM269A0A1B0GVZ9 245 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 CEACAM18A8MTB9 384 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 PRODHO43272 600 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 GYPAP02724 150 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ZSCAN26Q16670 478 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 TIGD6Q17RP2 521 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 PIGCQ92535 297 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 RORBQ92753 470 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 SPTSSAQ969W0 71 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 SPACA5Q96QH8 159 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 MYCBPQ99417 103 aaPredicted RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF649Q9BS31 505 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 PAPOLGQ9BWT3 736 aaKnown RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 ELL3Q9HB65 397 aaPredicted RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 MOV10Q9HCE1 1003 aaKnown RBP4.77□□□□□ -1.65
CPNE3-208ENST00000614678 GPR84Q9NQS5 396 aa4.77□□□□□ -1.65
CPNE3-208ENST00000614678 MDFIC2A0A1B0GVS7 189 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 VSTM5A8MXK1 200 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 WBP4O75554 376 aaKnown RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 PLATP00750 562 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 HMGN1P05114 100 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 PAICSP22234 425 aaKnown RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 ALDH3A2P51648 485 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 GPM6AP51674 278 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF684Q5T5D7 378 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 NXNL2Q5VZ03 156 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 DRAM2Q6UX65 266 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 ZBTB49Q6ZSB9 765 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 ANGPTL5Q86XS5 388 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 FAM90A1Q86YD7 464 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 ITPKCQ96DU7 683 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 RBMXL1Q96E39 390 aaKnown RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 OR8B4Q96RC9 309 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 TMPRSS13Q9BYE2 586 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 PBOV1Q9GZY1 135 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 C1orf123Q9NWV4 160 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 IL36RNQ9UBH0 155 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 METRNQ9UJH8 293 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 NPTNQ9Y639 398 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 A0A1B0GTI1 187 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 ANPEPP15144 967 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 KIR3DL2P43630 455 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 RAD23AP54725 363 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 TMEM33P57088 247 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 BTG1P62324 171 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 OR8G1Q15617 311 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 LIPNQ5VXI9 398 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 HIST2H2BDQ6DRA6 164 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 CNN2Q99439 309 aaKnown RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 RBM4BQ9BQ04 359 aaKnown RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 FAM118AQ9NWS6 357 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 IL19Q9UHD0 177 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 CLEC2DQ9UHP7 191 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 IGKV1-27A0A075B6S5 117 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms