RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 ACBD7Q8N6N7 88 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 BHLHE23Q8NDY6 225 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 OR5L1Q8NGL2 311 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 ZNF184Q99676 751 aaPredicted RBP7.32□□□□□ -1.24
SNCA-212ENST00000611107 ALG8Q9BVK2 526 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 JAM3Q9BX67 310 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 MS4A5Q9H3V2 200 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 PPP1R3EQ9H7J1 279 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 FGF20Q9NP95 211 aaPredicted RBP7.32□□□□□ -1.24
SNCA-212ENST00000611107 MYOZ1Q9NP98 299 aaPredicted RBP7.32□□□□□ -1.24
SNCA-212ENST00000611107 G6PC2Q9NQR9 355 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 TUBG2Q9NRH3 451 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 ERVK13-1Q9NX77 482 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 NUFIP1Q9UHK0 495 aaKnown RBP7.32□□□□□ -1.24
SNCA-212ENST00000611107 PCDHGB5Q9Y5G0 923 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 N6AMT1Q9Y5N5 214 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 MXRA5Q9NR99 2828 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 IGHV1-69-2A0A0G2JMI3 117 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 TMEM269A0A1B0GVZ9 245 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 DAPL1A0PJW8 107 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 METTL15A6NJ78 407 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 VSTM5A8MXK1 200 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 LOC110117498-PIK3R3F6TDL0 507 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 MLNRO43193 412 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 PPIHO43447 177 aaKnown RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 XRCC2O43543 280 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 TIMM8AO60220 97 aaPredicted RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 FAM20BO75063 409 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 SULT1C4O75897 302 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 RPP14O95059 124 aaKnown RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 FADS2O95864 444 aaKnown RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 TTRP02766 147 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 KRT8P05787 483 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 PIPP12273 146 aaPredicted RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 ACHEP22303 614 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 ACKR3P25106 362 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 PMELP40967 661 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 CRYBB2P43320 205 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 KIR3DL2P43630 455 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 GPR6P46095 362 aaPredicted RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 GZMKP49863 264 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 MMP16P51512 607 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 CDH15P55291 814 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 OR12D2P58182 307 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 MALLQ13021 153 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 DOC2BQ14184 412 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 OR8B8Q15620 311 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 SNCBQ16143 134 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 TIGD6Q17RP2 521 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 CR1LQ2VPA4 569 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 FAM201AQ5SY85 155 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 FAM120AOSQ5T036 256 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 LIPNQ5VXI9 398 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 AHSA2Q719I0 299 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 PGAP1Q75T13 922 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 MRPL21Q7Z2W9 205 aaKnown RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 FAM220AQ7Z4H9 259 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 CATSPERDQ86XM0 798 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 YIPF7Q8N8F6 280 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 OR10AD1Q8NGE0 317 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 OR56B2PQ8NGI1 322 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 OR52H1Q8NGJ2 320 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 SNX33Q8WV41 574 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 SGCDQ92629 289 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 RORBQ92753 470 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 GGHQ92820 318 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 DVL3Q92997 716 aaPredicted RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 HAVCR1Q96D42 359 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 REEP6Q96HR9 211 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 PGAM5Q96HS1 289 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 REPIN1Q9BWE0 567 aaKnown RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 OR10A2Q9H208 303 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 OPA3Q9H6K4 179 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 MOB1AQ9H8S9 216 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 INPP5EQ9NRR6 644 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 FKBP14Q9NWM8 211 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 PAK1IP1Q9NWT1 392 aaPredicted RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 NKIRAS2Q9NYR9 191 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 CGGBP1Q9UFW8 167 aaPredicted RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 GNG8Q9UK08 70 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 RAB26Q9ULW5 256 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 DIMT1Q9UNQ2 313 aaKnown RBP7.31□□□□□ -1.24
SNCA-212ENST00000611107 WIPI2Q9Y4P8 454 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 PCDHGB1Q9Y5G3 927 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 R4GMQ9 66 aa7.31□□□□□ -1.24
SNCA-212ENST00000611107 A0A0U1RQV5 110 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 A0A1B0GWJ7 208 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 PLSCR5A0PG75 271 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 CD300LBA8K4G0 201 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 ZNF205O95201 554 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 ADH4P08319 380 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 PSMB10P40306 273 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 ETV1P50549 477 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 SELENOVP59797 346 aa7.3□□□□□ -1.24
SNCA-212ENST00000611107 NANOS3P60323 173 aaKnown RBP7.3□□□□□ -1.24
SNCA-212ENST00000611107 SEC61A1P61619 476 aaKnown RBP7.3□□□□□ -1.24
SNCA-212ENST00000611107 ACTA2P62736 377 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms